| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2680 |
|---|
| Symbol | |
|---|
| ID | 4459014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3314814 |
|---|
| End bp | 3315200 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639703451 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_846793 |
|---|
| Protein GI | 116750106 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0686487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCGC GTGTTATGAG CCTGATGCGA AGAGGCGCCG TAACGTGTAC TGAGAATATG
AGCGTCCGGG AAGTGGCCCA GATCATGGTC GTCAACCGGA TCTACTATTG CGTGGTGGTC
AACGAGGACC ACGAGGTGCT GGGCGTCATC TCCGCCAGGA GCATACTGAG AGGATTCGGG
ATGGACTTGG ACCGGACGAA AGCCGGGGAC ATCCTTCTCC ACTATACCGT CACCATCACA
CCCAGGTCAC CGCTCAAGGA AGCCATCAAC CTGATGTGCA GGCGAAAAAT CGAACATCTC
ATCGTGGTTT CGGATCACCC CGGGAGCAAG ACGATCCTGG GCCTGCTCCA TGCCGAAGAC
ATAGTCGCCA GGATGGCAAC GGAATAG
|
|---|
| Protein sequence | MEARVMSLMR RGAVTCTENM SVREVAQIMV VNRIYYCVVV NEDHEVLGVI SARSILRGFG
MDLDRTKAGD ILLHYTVTIT PRSPLKEAIN LMCRRKIEHL IVVSDHPGSK TILGLLHAED
IVARMATE
|
|---|
| |