| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2671 |
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| Symbol | |
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| ID | 4459005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3302160 |
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| End bp | 3303962 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639703442 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_846784 |
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| Protein GI | 116750097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.472948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGAGCGC TTTCACTCAT CAGTGGCGCG GGTGAAGGGA TTGTCGTCGC CACCTTCCTG
CTGCTCACCG CAATGCCCCT GGTGGACCTG CTCGGACGCC CGCTCGCCAA CTTCCATATT
CCCGGCGCCT CCACCTACAC CCAGCAACTC ACGTTCTGCC TCACATTTCT GGGCGGGCTC
CTGGCCACCT GGACGGGGAA GCATTTGACG CTTTCGACCG CGGCGCTACT CCCGGAGGGG
CGCGTTCGCC GGACGGCAGA GTACCTGGCT TCGTGTACCG CTGCGGTGGT CACGGCAGTC
CTGACCTATG CCGGCGTCGG CGTGGTTTTG GCCGAGCGGC AGCAGGGGCA GAAACTGTCC
TTCGGCCTGC CGGTCTGGAT CAGCGAGAGC GTGATGCCCA TCGCGCTGGG TCTGATGGCC
CTGGTGTATA TTTATCGGTC TTCGCGGGGC TGGCCGGGGC GTGTCGGTGT GGCCGCGATC
GTGGGAGCGG TCTTCGCCCT GGGGCTGATT TCCCCGGCGC ATTCCATCGC GTGGCTCTTG
GGCGGCCTGT TGCTGGCGGC AACGTTGGTC GGGTCCCCTG TCTTCGCCGC CATGTCGGGC
ATGGGATTGA TTCTTTTCTG GCGGGACGCC ACACCGGTTG CGGCGGTCAG CGCCGAAATC
TACCGATTGA TCGCCTCGCC GACTCTGCCC GCTATCCCTC TGTTGACGGC CATCGGCTTC
GTGCTCGCGG AAACCCGGGC GCCGCATCGC CTGGTGCGCT TTTTCCACGC GATTTTCGGA
TTCATGCCCG GAGGCGTCGC GGTGCTTGTC GCCGCCGTCT GCGCGCTCTT CACCGCCTTC
ACGGGGGGCT CGGGCGTCAC CATCATCGCG CTGGGAGGCC TCGTTTACCC GATCCTGATC
GAGGACGGCT ATTCGGAGCG GTTCTCCCTG GGCCTCGTCA CCGCGGCGGG CAGCCTGGGG
CTCCTGTTCC CGCCGAGTCT TCCGGTCATC CTCTACAGCG TCGTGGCGAA GATCCCTGCC
GATCAGTTGT TTCTCGCCGG CCTGGCGCCC GGCTTGCTGC TTCTTTTGCT GGTGGCGGCT
CACGGCATCA ACGTCGGGCG CAAGCTCGAA TCGCGCCGAC AGCCGTTCGT GTGGCGCGAA
GCGCTGGCCG CTACCTGGGA AGCCAAGTGG GAGCTCTCCA TTCCGGTGGT GATGCTGCTC
ATGTTCGCCA CCGGCATCGC TTCTCTCCTG GAGACGTCCG CCTTCGCCTG CGCCTACACC
ATTTTCATTG CCTGTTTCAT TCAGCGGGAT CTGCACCCGT TCAAGCAGTT GCCGCGAGTG
CTGGTGAGCG CCGCGGTGCT CGTGGGTGCG GTGCTGACCC TCCTCAGTTG CGCGATGGGG
CTGACAAGCT ACTTGGTGGA CGCCCAGATT CCGGATCGCC TCCTGGGGTT CGTGAAAACC
CACATCGAGT CGCCGCTGGT CTTCCTGCTC GCCCTCAATC TCCTGCTCCT CGTTCTTGGC
AGCGTGCTCG AGATCTTCTC TGCGATCATC GTCCTGACGC CGTTGATCGT TCCTCTCGGA
GTGGCGTTCG GGATCCATCC GGTCCACCTG GGCGTCATCT TCCTGGCCAA CCTCGAGCTG
GGATTCCTCT TCCCCCCGGT CGGCCTCAAC CTGTTCCTCT CGTCGTCGCG CTTCGGAAAG
CCCATGGTCG AGCTGTACCG GGACGTTCTT CCGCTGCTGG TCATTCTCGG CATCGGAGTG
CTTCTCATCA CCTATGCGCC CGTGCTCTCC CTGGGCATAC CGCGTCTTTT GGGCTTCTTT
TGA
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| Protein sequence | MRALSLISGA GEGIVVATFL LLTAMPLVDL LGRPLANFHI PGASTYTQQL TFCLTFLGGL
LATWTGKHLT LSTAALLPEG RVRRTAEYLA SCTAAVVTAV LTYAGVGVVL AERQQGQKLS
FGLPVWISES VMPIALGLMA LVYIYRSSRG WPGRVGVAAI VGAVFALGLI SPAHSIAWLL
GGLLLAATLV GSPVFAAMSG MGLILFWRDA TPVAAVSAEI YRLIASPTLP AIPLLTAIGF
VLAETRAPHR LVRFFHAIFG FMPGGVAVLV AAVCALFTAF TGGSGVTIIA LGGLVYPILI
EDGYSERFSL GLVTAAGSLG LLFPPSLPVI LYSVVAKIPA DQLFLAGLAP GLLLLLLVAA
HGINVGRKLE SRRQPFVWRE ALAATWEAKW ELSIPVVMLL MFATGIASLL ETSAFACAYT
IFIACFIQRD LHPFKQLPRV LVSAAVLVGA VLTLLSCAMG LTSYLVDAQI PDRLLGFVKT
HIESPLVFLL ALNLLLLVLG SVLEIFSAII VLTPLIVPLG VAFGIHPVHL GVIFLANLEL
GFLFPPVGLN LFLSSSRFGK PMVELYRDVL PLLVILGIGV LLITYAPVLS LGIPRLLGFF
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