| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2557 |
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| Symbol | |
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| ID | 4459138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3153815 |
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| End bp | 3159655 |
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| Gene Length | 5841 bp |
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| Protein Length | 1946 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703323 |
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| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like |
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| Protein accession | YP_846670 |
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| Protein GI | 116749983 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGA AAGCAACCGT TGCGATTATT CTGGTGATGG CAATTTGCCT CTCGAGCACG
ATTTTCTGTC CGAACGTCGC CAGGGCGGAA ACGATGGGCG ATTACAGTCT CATCCCTCCA
TTCGTCACGG CCGGCGCTTC CCCCCTGGTC ATGCTCGTGC TGGGCCGGGA CCACAAGCTA
TACTTTCCGG CGTACAACGA CGCCATCGAT CTCGACGCGG ACGGCATCAT CGAGACGCAT
TTCAAGCCGA GCATAGAGTA TTATGGATAT TTCGACAGCA ACAAATGCTA CAGCTACAAC
TCCAGCGCTT CACCCAAGCG CTTCGATCCG TTCGGTCCCG CCACCATGCC GGGCAGGACC
TGCGACGGTT CCCACTGGAG CGGCAACTTC CTCAACTACC TGACCATGTC GCGCATGGAC
TGCATGAGAA AGGTGTTCTA CGGCGGCTAC CGTGCGGTGG ACACCACGAC GGAAACCGTG
CTTGAGCGGG TCCTGCTCCC GATGGACACG CACTCCTGGG GCAAGGAATA CTGCAGCATC
GCTCACGACG GTTACGACAT CAGGCAATAC ACTCCCCTTT CGCTCCCCAC CGCGGGTTTC
CGCCACCTGT TCGCAAACAC CACCCCGTCC TCCGCGGGTG ACCCGACGTT GCGCGTTCTC
CCCAATAATT TTCATCGCAT CTATGAGTGG GTGTCGAAGG AACGCCCGGA GGCGGACACG
AGTCTGGTGA TTTCTTCGGC GTCGTCCGGC ACTCTCCCGA ACAGCCACAC CGACTTTACA
AGCCGGTTCT CGACATGGGG CGGGACCACT ACCCCCATTT ATCTCGAATG CGTAACGACA
CCGGCGGCGA TTGCCGGGAC AGGAAACCCC TGCGCCGGAG CCGACCAAAT GTATGAGAGC
GACGTTTTCC TCTCCAAATT CACCGCGACG CTCACCATCA AGACAGCGGG ATCCTACACC
TTCGGAGTGG AAGGGGACGA CAGCGTCGAG GTCCGGATCA AGGACTCCGG CGGCACCACG
CGGGTCAACT GGGTCGGCGT GTACGGCGAG CACGATCTGC CCGGCATTCC TCCCTCGGCC
CCCGCGAATT CGTCCAGCGC CGTGACTCTC GCGGCCGGGA ACTACACGAT TGAATTCAAT
CATGCCCACA AGTCGTCGGA GACGGCGGGC TATTACTTGT TCTGGAAGGG GCCCGACTCC
GGCTCCACCA CCGTCGCTTC CATCGTGCCT CCTTATTCCA CGGCGACGCA ATGCGGGCTC
ACCAACGTCG TCCATACCGT CTACGGCATG AACCTGCTCG CATCGGCGCT GACCGACTAC
AGCGTGCGGG TCAAGGTCGG CGTCAACTCC GGCACGATCA CGCCCGAGAG CAACTGCAAG
AGGTACGGCA CCGAAGCGAG CCCCATCTAC AAGCCGGTGG GCATCCTCCA GCGGTTCGGA
GCATCGGATC GCATCCTCTT CGGCCTCATG ACCGGCTCGT ACAGCAAGAA CCTCCATGGA
GGCGTCCTCA GAAAGAAAGT GTCCTCGATT TCCAATGAAA TCAATGCATC CACCGGGGTA
TTCACCAGCA CGGTGGGAAT CATCAAGACC CTCGACCGCA TCAAGACTTA CGGCTACAGC
TGGAGCAGCT ACGATTACGG CGCGTCGGGA CCTGCATGCT GCCCCCTGAT CGTGGACGAG
CCGCTGGATG AATACCAGGC AAGCGCCGGA AGCGGGGCCT GCACCATGTG GGGAAATCCC
ATCGCCGAGA TGATGTATGA GACCCTGCGG TATTTTGCGG GTCACGGCGC CCCGACAACC
ACTTACGACT ACGGCACGGG TACGACGATC GACAGCTCCA TGAATCTGCC GCGGGAAACG
GACTGGTCGG ATCCATACGC GACGCGGCCC AGTTGCTCCA AGCCGTTCAT GGTCGTCATC
AGCGACATCT ACCCGTCCTA CGACACGGAC GACCTGCCGG GAGCCTCGTT CGGGAGCTTC
TCTCCCACTT CGACCCTGAC GGGCAAAAAC ATCGCAACCG GCGCAACGGA AACGCTCAAC
GTCACCGACC TGGCCAACAC GATCTCGACC GGGGAAGGCA TCAACGGCCA TGATTACTTC
GTCGGGCAGA GCGGGGCGTC CGCGGGCTAT ACCGGCGCAT GCACGGGCCA GACGGTCAGC
GGGTTCGGCA ACATCCGGGG GCTCTGTCCC GACGAGCCCA CGAAGGAAGG CGGTTACTAC
TCCGCTGCCG TCGCCCATTT CGGCCGCAGG AACAAGATCA CTTCGTCCAC GACCGACAGC
CAGAGCGTCA CGACCTACAC CATCGGTCTG TCCTCTCCCA ATCCCAACCT GGAGATCCCC
GTCGGAGACA AGAAGATCAC CGTGGTCCCG TTCGCGAAGT CCACGGGAAC CGGTTACGGC
ATCCCCTTGA CCCAGGGGGC GTTCCAACCG ACCAATCAGA ACGCGGGATT CTACCTCAAC
AATCTCGCCC CCAATATGAC TTCCGGGGAA TTCATGATCA ACTGGGAGGA TGCGGAGCAG
GGGAACGACT TCGACCAAGA CGTCCTGGTG GTCTACAAGT GGCAGGTCAT CGACGACTCC
GGTAACGCGG TCTCCGATCC CGCGCTCGGC ACCCAGGTGG TCATCAACCT GAGGTGCCTG
TATTCCTCGC AGGGTCTCGA TACGCATTCG GGATTCACCC TCTCCGGAGC GCTCAATCCG
GACGGCACCG ATGCCGACGG CCCCTGGCTC GTGGTCAAGG ACATCAACAA TACCTACCAG
TCCTACTGGC TGGACTACCA GAATTACAGG GGGTATACCG GCGTGACGGC GCTGACGACG
AGTTGGACCG GCGTGTTCAA GCCCAAGCCC AGCGCCACGG GGGCCGACCT GATCAAGACC
CCCCTGTGGT ATGCCGCCAA GTGGGGAGGA TTCGAGGACG CCGACGGCGA TGACGTGCCC
GACCTCCAGC AGGAGTGGGA CAAGGGGAAG ACCGGAACGC CCGACACCTA TTTTTACGTG
ACAAGCCCGC TAAAGCTCGA AAACGCGCTG AACAGCTCCT TTTCCGACAT TCTGCGGCGT
GCCGCCGCGG GAACTGCGGC GTCGGTCATC TCCAGCACGC GTTCCGGTGA AGGCGCCATC
TACCAAGCGC TCTTTTATCC CGAATTCAAG GACGACCTCG GAAACACCGT GAACTGGGTG
GGCGAGATCC ACTCGATGAT GGTGGATTCC TATGGGAATA TGAGGGAGGA CACCAACGGA
AATCACGTGC TCGACGTGAC GAACTGCCCC GACGACGTGA GCGGCAACCC CCTGTGCGAC
TACATTCTGC AGTTCAGCTC GGAATTCATC AACATAGTTT ACAAGTACAA CGACGCCAAT
GGGAACAGCC AGCTCGACAC CGACGAAACC GTCAGTCCCA TCACCATCGG CACCATGCGA
GGCTGCCGGG CCGATGAAAT GGCGCTGCCG ATCGCATCGC GCCAGTGCAT CGCGTACCTG
TGGTCGACGA GCGCCACGAT GAACGCCATC GCGGATTCCG ACATCATCAC CCAGCGCAGC
TCCTACGACG ACACCAGCAA CAAGCGGTAC GTCTTCACCT TCATCGACGG GAAGGACAGC
ATCGGGAACA TCGACATGAT TCCGCAAAGC ACGGAAATCG TCGATTTTAC CGAAGCCAAC
TCGGAAATCA TCAAACCTTA CCTGCACATG TACAAGCCGA TTTTCGGGAC CTTGCCCGGC
TGGGTTCCGA CGGTGAGCAT GACCGCCGGC ACCCCGTACC AGGATTTCCT GTCGAAGCAG
GCGAAGCGGA TCATCAATTA CATCCGCGGC CAGGATCAGG CAGCCTACAC GTCCTCCACG
TCTCCGGCCT ACACCATCCC GGCGATGCGG CCCAGGCAAT CCAACTATGA CGAAAGCGGG
ACCGCCGAAA CCTGGAGGCT CGGGGACATC GTGTATTCCA CCCCGACCGT GGTGGCGGCG
CCCTCCGAAG ATTTCGATCT TCTCTACAAG GACACCAGCT ACATCGATTT CTACCGCAAG
TACCGGAACA GGCGGATCGT CATCTACGCG GGAGGAAACG ACGGCATGCT GCATGCCTTC
AACGCGGGTT TCTACAGCTC GAGACACAAG AAGTTCTGCC TGGACTGGAA TTCGAGCCTT
ACCGATCCTT GCCTCGATGC GGGCCGGGAT CTGGGCACCG AGCTGTGGGC ATATGTTCCG
TATAACCTGC TGCCGCATCT CTACTGGCTG ACCGATGCGG CGTACACTTC CGAATATCAT
GTCAACTACG TGGATTTGAA ACCAAGAATC TTCGACGCCA AGATCTTCGC GGCGGATACC
GACCATCCCA ACGGATGGGG AACGGTGATG GTGGTCGGAA TGAGATTCGG GGGAGGCAAG
ATCCGGGCCG ATCTGAACCA CGACAACACT TACAGCACCT CGAGCACGCC CGCGGACCGG
ATCATGAGAT CGTCCTTCTT CGTCATGGAC ATCACGAATC CGGAGGTTCC CCCGAAGCTC
CTGGCGGAGA TTTCGGATGA TTCCCTCGGG TTCACGACGT GTTATCCCGC CGTGCTCACA
ATGAAAGACA AGAACCCCAC GGCCACTTTG AACGACTGGT ACCTGGTGCT CGGGTCGGGA
CCGCACGGGG CCGGCGGGCC CGACGGCAAC CCCGGCGCCG ACAACACGGC GCTCACGTAC
GGCACGAGCG ACCAGCCGGG CAAAATCGTG CTGGTGAGCC TCAACAACCT GGCGCAAGGG
ACCACGGCCA TGCAGACCCT CGACGGAACC ACCGACGCCT TGTCGTTGGC CGGCCAGGTG
AAGCCGTTCT CCAGCCTCGA TACGTATTCC TTCATTTCCG ATCCCATCGC CGTGGACTAC
GACCTCGACT ACAAGGCGGA TTCAATCTAT TACGGCACCG TAATGGGAGG CTTCGTCACG
GCTCCGGTAG CCGGCCCCAT CCCGACCTCG CCTCCTCCGT GGGGCGGGAA GCTGCGACGG
CTCGTAACGG CCGACGATCC GGATCCTGCC ACCTGGATCA AGAACAGCGT CCTTATCGAC
CTGTCCAACA TCATCACGTA CGATGGCGGC GGCGCGGTGG TGAAGGACTA TCGTTACGGT
CAGCCCATTG TCGCCGCCCC CGCGATCGGC AAGGACGCGA GCAAGAACTG CTGGGTGTTC
TTCGGAACGG GCAGGTTCTA CAACCGGTTG GACGCCACCG ATGCCACGAG CAACAATATG
ATGTCCTACT ACGGTATCAA GGAGCCGGCG ACCGGCACCA ATCCTCCCGT TCTCACCTGG
GCCACGGTGG ATCGCAGGGA TTTGCTCGAT GTGACCCAGG CGCAGGTTTT CGAGGGAGGC
TCCACGGTCC AGGGCGTTAC GGGCGCGACA AATTTCGACG CGCTCAGGTC CCTCGTTGCC
ACGAAATCGG GCTGGTTGAT CGATTTCGTC AACCCGACGT CGCCCTTTCT CACCGGGGAA
CGGAACCTCG GTCAGGCCAC CCTGCTGGGC GACATTCTCA CGTTCACCAC CTACACGCCT
TCGACGAACG TCTGCAAGTT CGAGGGAACC AGTGTATTGT ACGCCTGTTA TTACGGCACG
GGCACGGCCT ATCCGGAATC CGTCATCGGG CTCGGCACCA ACTTTGTCGT CGAAGGCGGC
ACCAACAAGT TTGAGGTGTT GAGGAAGGTC TCCCTGGGAC AAGGCCTGAC CCTGACGCCG
AACATCCATA CCGGGAGGGA AGACGGTTCG AACGTCTACG TCCAGACGAG TACCGGCACG
ATCCTCCAGC TCAAGGAGGC AAACCCCGGC ATGGTGAAGA GCGGCAAGGC CGGGTGGGAG
GAATGGATGA CACAGTACTA A
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| Protein sequence | MFKKATVAII LVMAICLSST IFCPNVARAE TMGDYSLIPP FVTAGASPLV MLVLGRDHKL
YFPAYNDAID LDADGIIETH FKPSIEYYGY FDSNKCYSYN SSASPKRFDP FGPATMPGRT
CDGSHWSGNF LNYLTMSRMD CMRKVFYGGY RAVDTTTETV LERVLLPMDT HSWGKEYCSI
AHDGYDIRQY TPLSLPTAGF RHLFANTTPS SAGDPTLRVL PNNFHRIYEW VSKERPEADT
SLVISSASSG TLPNSHTDFT SRFSTWGGTT TPIYLECVTT PAAIAGTGNP CAGADQMYES
DVFLSKFTAT LTIKTAGSYT FGVEGDDSVE VRIKDSGGTT RVNWVGVYGE HDLPGIPPSA
PANSSSAVTL AAGNYTIEFN HAHKSSETAG YYLFWKGPDS GSTTVASIVP PYSTATQCGL
TNVVHTVYGM NLLASALTDY SVRVKVGVNS GTITPESNCK RYGTEASPIY KPVGILQRFG
ASDRILFGLM TGSYSKNLHG GVLRKKVSSI SNEINASTGV FTSTVGIIKT LDRIKTYGYS
WSSYDYGASG PACCPLIVDE PLDEYQASAG SGACTMWGNP IAEMMYETLR YFAGHGAPTT
TYDYGTGTTI DSSMNLPRET DWSDPYATRP SCSKPFMVVI SDIYPSYDTD DLPGASFGSF
SPTSTLTGKN IATGATETLN VTDLANTIST GEGINGHDYF VGQSGASAGY TGACTGQTVS
GFGNIRGLCP DEPTKEGGYY SAAVAHFGRR NKITSSTTDS QSVTTYTIGL SSPNPNLEIP
VGDKKITVVP FAKSTGTGYG IPLTQGAFQP TNQNAGFYLN NLAPNMTSGE FMINWEDAEQ
GNDFDQDVLV VYKWQVIDDS GNAVSDPALG TQVVINLRCL YSSQGLDTHS GFTLSGALNP
DGTDADGPWL VVKDINNTYQ SYWLDYQNYR GYTGVTALTT SWTGVFKPKP SATGADLIKT
PLWYAAKWGG FEDADGDDVP DLQQEWDKGK TGTPDTYFYV TSPLKLENAL NSSFSDILRR
AAAGTAASVI SSTRSGEGAI YQALFYPEFK DDLGNTVNWV GEIHSMMVDS YGNMREDTNG
NHVLDVTNCP DDVSGNPLCD YILQFSSEFI NIVYKYNDAN GNSQLDTDET VSPITIGTMR
GCRADEMALP IASRQCIAYL WSTSATMNAI ADSDIITQRS SYDDTSNKRY VFTFIDGKDS
IGNIDMIPQS TEIVDFTEAN SEIIKPYLHM YKPIFGTLPG WVPTVSMTAG TPYQDFLSKQ
AKRIINYIRG QDQAAYTSST SPAYTIPAMR PRQSNYDESG TAETWRLGDI VYSTPTVVAA
PSEDFDLLYK DTSYIDFYRK YRNRRIVIYA GGNDGMLHAF NAGFYSSRHK KFCLDWNSSL
TDPCLDAGRD LGTELWAYVP YNLLPHLYWL TDAAYTSEYH VNYVDLKPRI FDAKIFAADT
DHPNGWGTVM VVGMRFGGGK IRADLNHDNT YSTSSTPADR IMRSSFFVMD ITNPEVPPKL
LAEISDDSLG FTTCYPAVLT MKDKNPTATL NDWYLVLGSG PHGAGGPDGN PGADNTALTY
GTSDQPGKIV LVSLNNLAQG TTAMQTLDGT TDALSLAGQV KPFSSLDTYS FISDPIAVDY
DLDYKADSIY YGTVMGGFVT APVAGPIPTS PPPWGGKLRR LVTADDPDPA TWIKNSVLID
LSNIITYDGG GAVVKDYRYG QPIVAAPAIG KDASKNCWVF FGTGRFYNRL DATDATSNNM
MSYYGIKEPA TGTNPPVLTW ATVDRRDLLD VTQAQVFEGG STVQGVTGAT NFDALRSLVA
TKSGWLIDFV NPTSPFLTGE RNLGQATLLG DILTFTTYTP STNVCKFEGT SVLYACYYGT
GTAYPESVIG LGTNFVVEGG TNKFEVLRKV SLGQGLTLTP NIHTGREDGS NVYVQTSTGT
ILQLKEANPG MVKSGKAGWE EWMTQY
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