Gene Sfum_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2504 
Symbol 
ID4459184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3086414 
End bp3086950 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID639703269 
Producthypothetical protein 
Protein accessionYP_846618 
Protein GI116749931 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGA TCATCGACTC CAGAGAACAA ATACCCTACG ACTTCGCCAC CTATGATGTG 
GAAACCGAAC GCGGCACCTT GCACACCGGC GATTACTCCC TTGCGGGATT CGAGGATCGG
GTTGCCATCG AGCGAAAATC GCTGGACGAC CTCATCGGAT GCTTGTGCCA TGATCGTGAA
CGATTTGAGA AGGAGTTATG CCGGGCAAAG GCGCTCGACT TCTTCAGTGT GGTCATCGAA
GGCGCGCTCT CGGACATCCT GGACGGTCGG TTTCGTTCGC GGATGACAGT CAACGCTGCG
GTGGAAAGTA TCGCGGCGTT CAGCACCAGG TATCGCACAC CCTTTTTGTT CTGTGGGTCA
CGAGCGGGCG GAGAGCGCAT GACCTTTTCG CTCCTGAGCA AATATGCCCA CAACATCTTG
CGCGCCGCGC GGATCGGAAA AATGACAGGC TATGCCCCTA GGGGGAGGGG TCCGACACCC
CCCGGCGTTA ATACTCCTCG AGGGCATGCG CGGATCTTCG AGGGGAAATC GTCATGA
 
Protein sequence
MIVIIDSREQ IPYDFATYDV ETERGTLHTG DYSLAGFEDR VAIERKSLDD LIGCLCHDRE 
RFEKELCRAK ALDFFSVVIE GALSDILDGR FRSRMTVNAA VESIAAFSTR YRTPFLFCGS
RAGGERMTFS LLSKYAHNIL RAARIGKMTG YAPRGRGPTP PGVNTPRGHA RIFEGKSS