| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2390 |
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| Symbol | |
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| ID | 4459307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2950052 |
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| End bp | 2951098 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639703155 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_846506 |
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| Protein GI | 116749819 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.313977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAG CCGTTCGCCG GGTATTGCTT CTGATTCTGA TCGTGACGGC AGCCGGAGCG
GGTGTATGGC TGTGGCACAC TTACCGGGGA AAGACTTCGG TTGACGCACT CGTGCTCTAT
GGAAATGTGG AAATACGGCA AGTGGAGCTT GCTTTCAACA ACAGCCAGCG GATCGCTTCG
ATGCTCGTCA GGGAAGGGGA TCGGGTCAAG CCCGGCCAAC TCCTGGCCAC TCTGGAGACC
GAGCGGCTCC AATATGCCGT GGATCGTTCC AGGGGGCAGT TGGAATCTCA ACGGCAGACG
GTGTCGAGGC TGATCGCCGG CAGCCGGCCG GAAGAGGTCC GAAAAGCCCG TGCCGACGTC
GCCGCCGCCC AGGCTCAGGC CGCCAACGCC ACGAATTTCG CCGGGCGCCG CGCACCGCTT
GCGGAAAGGA ACGCAGTTTC CAGGGAAGAA GCGGAAACGG CCAGGTACAA CGCGGAAACG
GCACAGGCGC AACACAAGTC GGCTCAGGAA ACACTGGCGC TTGCCCTGGA AGGGCCGCGC
ATCGAGGACG TCGAATCCGC CAAGGCAACG TTGCAGGCGC TCGAAGCGGA ATACGCCCTG
GCCTTGAAGC AGCTTGCCGA CGCCTCTCTG TACGCTCCGG CGGACGGCAT CATCCAGAAC
CGAATCCTGG AACCCGGCGA TATGGTCACG CCCCAAAAAC CGGTTTACAC CCTCGCCCTG
ACGGAACCTC TGTGGGTCCG GGCCTACGCT TCCGAATCGG ACCTCGGCAA GCTCCGGCCC
GGCATGATTG CCGAGGTGAC CACGGACAGT TACCCGGGCA AGCGTTACCG CGGATGGATC
GGTTTCATCT CGCCCACGGC CCAGTTCACC CCCAAGACCG TGGAGACCCT GGAAATACGG
ACCAGTCTGG TGTACCAGGT GCGCGTCTTC GTCTGCAACC CGCAGGACGA GCTTCGGCTG
GGAATGCCCG CCACCGTCAC GGTCCCTTTG AACCGCGCCT CGACCCCGGA AAAATCCGTC
CCCGAGGATC CCTGCAAGGA ACCCTGA
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| Protein sequence | MRKAVRRVLL LILIVTAAGA GVWLWHTYRG KTSVDALVLY GNVEIRQVEL AFNNSQRIAS
MLVREGDRVK PGQLLATLET ERLQYAVDRS RGQLESQRQT VSRLIAGSRP EEVRKARADV
AAAQAQAANA TNFAGRRAPL AERNAVSREE AETARYNAET AQAQHKSAQE TLALALEGPR
IEDVESAKAT LQALEAEYAL ALKQLADASL YAPADGIIQN RILEPGDMVT PQKPVYTLAL
TEPLWVRAYA SESDLGKLRP GMIAEVTTDS YPGKRYRGWI GFISPTAQFT PKTVETLEIR
TSLVYQVRVF VCNPQDELRL GMPATVTVPL NRASTPEKSV PEDPCKEP
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