Gene Sfum_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2250 
Symbol 
ID4459446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2769033 
End bp2769968 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID639703016 
Producthypothetical protein 
Protein accessionYP_846367 
Protein GI116749680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.741825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCTGG TCTTCAGCAT CGATGTTGAA GAGGAAGGGC TGTTCACCGG CGAATATTCC 
CGGGAGCCCC CGGGCGTGGA GAACATACGG GGGCTCGATC GCCTCGAGTT CGTTTCGAAG
GAATTCGGTT TTCCCCTGAC CCTGCTGGTT TCTTACCGGG TGGCCCGGGA TGCGTGTGCC
CGGAAGGTTC TCCTGGACTG GAAAGATCTG AGGGGGGCTG AAATCGGCGC GCATCTGCAC
CATTGGAGCA CTCCTCCGTT CGACAAACTG CCCTATCCCG AACCGGTCCC CGCGGACCTG
TTGCCGCCGG CTCTTCTGCG GGCCAAGCTC GAAAACCTGC TCGACGCGTT GAAGACGAAC
CTCGGCGTGA CCGCGCGTTC GTTCCGGATG GGACGGTTCG ATATCGGGAC ACAGGTTCCA
AAGCTGTTGC CTGAACTGGG CCTGCTCACC GACAGCAGCA TCGTTCCCTT GCGCCGAACG
GCCGGAGGAC CGGATCATTT CATGGCCCCC TGCGAACCCT ACCGCCTGGA AGGTTCCGAC
GGCCGGACCC CCTCGGTACT GGAAGTCCCC CTCACCATGA TTCCCCTCTT TCCCCGGACG
CGAAACGCCG TCTATCGGCA GTCATCGTTT CTGCCTCCCC GTGTTCGGGA TTTCCTGCTG
ACCGCCTATC GCCATGCCGC GGTCGTCGGG GTCCACCCCG CCTGGTTTTC TCTGAGCGCA
ATGAAGCTTG CCGCGAATCT GCACAGAGCC CGCGGCGGAT GTGTCCTGTG CATGTTCCTC
CATTCCTCCG AAGTCCATCC GGGAGCGACG CCAAAATTCC GAACGGAGTC CGATGTCAGG
CGCCTGGTGG ACAAGATCCG GGCCTTCCTG GCCTGGCTGG TGCGCACGGG TCCGGTCCGG
GGGATGACGC TGGAGGACCT TCGCGCTTTT TTTTGA
 
Protein sequence
MKLVFSIDVE EEGLFTGEYS REPPGVENIR GLDRLEFVSK EFGFPLTLLV SYRVARDACA 
RKVLLDWKDL RGAEIGAHLH HWSTPPFDKL PYPEPVPADL LPPALLRAKL ENLLDALKTN
LGVTARSFRM GRFDIGTQVP KLLPELGLLT DSSIVPLRRT AGGPDHFMAP CEPYRLEGSD
GRTPSVLEVP LTMIPLFPRT RNAVYRQSSF LPPRVRDFLL TAYRHAAVVG VHPAWFSLSA
MKLAANLHRA RGGCVLCMFL HSSEVHPGAT PKFRTESDVR RLVDKIRAFL AWLVRTGPVR
GMTLEDLRAF F