Gene Sfum_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2166 
Symbol 
ID4459520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2651513 
End bp2652229 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID639702932 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_846283 
Protein GI116749596 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGAC TTGCAATCAA TGTGGATCAT GTCGCGACGG TCAGGCAGGC ACGACGGGCG 
TCGGAACCCG ACCCTGTCAC CGCCGCCGCC CTGGCTGAGC TCGCCGGAGC GCACGGCATC
GTGGTGCATC TCCGGGAGGA CCGGCGGCAC ATTCAGGACA GGGATGTGCA GGTCTTGCGA
CAGACCGTGA AGAGCAAGCT GAACCTGGAA ATGGCGGCGA CCAGGGAAAT GATCCAGATC
GCGCTCAACA TCAAACCGGA GATGGTCACC CTCGTCCCCG AAAAGCGCCA GGAACTGACG
ACCGAGGGGG GCCTCGATGT CGTGAGCTTC GAGGGCGCGC TGGAGGAAGC CATCAAGACC
CTTCACGAGG GAGGCATCGC GGTCAGCCTG TTCATCAACC CGGACCCCAG GCACATCAAG
GTGGCCCACC GGCTCGAAGC CGAGTACGTG GAGATCCACA CCGGAATGTT CGCCGAGGCG
GATTCCTACA CCCGGCGCCA GGAAGAGTAC GAGCGCGTCG TGACCTCGGC CAAACTCGCC
CGCAAGCTGG GTCTGGGCGC TCACGCCGGT CATGGGATAG GCTACCAGAA CGTGCTGTGG
CTGAGGAACA TCCCCGAAAT CCAGGAATTC AGCATCGGCC ATGCCGTGAT TGCCCGGGCG
GTGCTGGTGG GCATGGAACG CGCCGTCCGG GAAATGCTTG CGCTGGTGAA CGGTTAG
 
Protein sequence
MARLAINVDH VATVRQARRA SEPDPVTAAA LAELAGAHGI VVHLREDRRH IQDRDVQVLR 
QTVKSKLNLE MAATREMIQI ALNIKPEMVT LVPEKRQELT TEGGLDVVSF EGALEEAIKT
LHEGGIAVSL FINPDPRHIK VAHRLEAEYV EIHTGMFAEA DSYTRRQEEY ERVVTSAKLA
RKLGLGAHAG HGIGYQNVLW LRNIPEIQEF SIGHAVIARA VLVGMERAVR EMLALVNG