Gene Sfum_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2126 
Symbol 
ID4459550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2600530 
End bp2601030 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content54% 
IMG OID639702893 
Producthistidine triad (HIT) protein 
Protein accessionYP_846244 
Protein GI116749557 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000712705 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGAACC TGTGGGCTCC CTGGCGTATC GAATACATCT TGGGAAAGCG AGAACCTTAC 
TGCATATTTT GTCCCGAAGG AGGCGGCCTG TCCGACGAGG AACGTCTCAT TCTTCACCGT
GGAACGCACA CCATGGTGAT GATGAACAAG TATCCCTACA ACAACGGACA TCTGCTTGTG
GCTCCGTGGA GGCACGTATC CGAAATGGAC GGCCTCCGGG ACGAAGAGAT GCTCGATCTC
ATGAAATGGA TCAAGCTCTG CACTCAGGTT CTCAGGCGGG TCATGAATGC GGAGGGGTTC
AACGTGGGAA TGAATCTCGG GACCGTTGCG GGGGCCGGAG TCAAAGACCA CCTCCACTTT
CACGTAGTGC CGCGCTGGGG AGGAGACACG AACTTCCTCA CAGTGTTCGC CGATATCAGA
AGCATCCCGG AACACCTGAA GCAGACATAC ACCAAGTTGT TACCCCATTT TAAAAAGGAG
AGCGCTCATG AGGTGGTTTA A
 
Protein sequence
MQNLWAPWRI EYILGKREPY CIFCPEGGGL SDEERLILHR GTHTMVMMNK YPYNNGHLLV 
APWRHVSEMD GLRDEEMLDL MKWIKLCTQV LRRVMNAEGF NVGMNLGTVA GAGVKDHLHF
HVVPRWGGDT NFLTVFADIR SIPEHLKQTY TKLLPHFKKE SAHEVV