Gene Sfum_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2058 
Symbol 
ID4459638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2517129 
End bp2517740 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID639702825 
Productpreprotein translocase, SecG subunit 
Protein accessionYP_846176 
Protein GI116749489 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1314] Preprotein translocase subunit SecG 
TIGRFAM ID[TIGR00810] protein translocase, SecG subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.753459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATTT TCTTGATCCT GCTTCATGTT GTGGCCAGCG TGGCATTGAT CCTGATCGTC 
CTGCTCCAGA CCGGCCGCGG GGCCGAGATG GGGGCGGCGT TCGGGGGCGC CTCCCAGACG
CTTTTCGGCG GCGGGGGCGG TTCGACCTTC ATGAGCAAGC TGACTACCGG GGCGGCGATC
GTTTTCATGC TGACGTGTCT CAGCTTGGCT TACATATCGG CGGGTCCGCA AAGCCGGTCC
GTCATGAAGG ATATTCCCGC GGAAGAACAG CAGCCGCCGC AGCCGCAGGG ACCGGCCATT
CCGGAAGCAA AGCCGGTTCA ACCCGCGCCC GCTGATCCTG CGACGGCGCC TCAGGTCCAG
CCCGCACCGC AGGCGCAGGC CGTGCCTCAG GGCGGTACGG CGCCCCAGGC CCAGGCGGAG
GCTCCGAAGG AAGCAAAGCC CGCTCCGGCA GCCGAGAAAG CGGCGCCTGC CGCGCCTGCT
CCGGCCAAGG AGACCAAGAA GGCTGCGCCT GCCGCTGCCG CCCCGGCCAA GGAGCCCAAG
AAAGCGACGG CAGGCCCGGG ACAGCAGCCG GCAAAGAAGC AAGCCGACAA GGGCGCCCAG
AAACAGCAGT AG
 
Protein sequence
MYIFLILLHV VASVALILIV LLQTGRGAEM GAAFGGASQT LFGGGGGSTF MSKLTTGAAI 
VFMLTCLSLA YISAGPQSRS VMKDIPAEEQ QPPQPQGPAI PEAKPVQPAP ADPATAPQVQ
PAPQAQAVPQ GGTAPQAQAE APKEAKPAPA AEKAAPAAPA PAKETKKAAP AAAAPAKEPK
KATAGPGQQP AKKQADKGAQ KQQ