Gene Sfum_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2014 
Symbol 
ID4459680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2465182 
End bp2466225 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content64% 
IMG OID639702780 
Producthypothetical protein 
Protein accessionYP_846132 
Protein GI116749445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.634668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG CGGAACGCGT TCGACGCATT GAACCGGAGG AGCACGTTTT GCCTTCCGGC 
GAAAAGATGG AGGTGGGCCT TTTCCGCCCG GAGGACGGAG CCGGTATCGG GGAACTGTTC
AGAACGATCT ATGGCGACGG GTACCCGGCG CGGCACGTGT ACGACCCGGT CGAGCTTGCG
GCGGCCCTCG AGCGGGGCGA CAACTACCCG GTGGTCGCGC GCGGACCGGT CGGCAAGATC
ATCGGCCATG TGGCCCTCTT TCGTTCCTCG CCTTACGGGA AGCTCTTTGA GGCGGGCGCC
GGGGCTGTTC TGCCGGAACA TCGAAACGCC GGAATCAACC GGCTCCTGCT GGCTTTCGCA
TACGAGCGCC TGGCCCCGGA GTTGGAACTG GAGGAAACCT GGGGAGAAGC GGTCTGCAAC
CATATATACA TGCAAAGGAC AATCGCCACC TTCAACCACG TCGAAACCGC CCTGGAAGTG
GCGCTCATGC CTGCCGAGGC CTATGAGAAG GAACGGAGTG CCGCCGGGAG GGTGGCGTCG
GTGGCTGTCT TTCGTGCCTA CAGGCCGCGG CCTCACGTGG TCCGCGTGCC TGAAGCCTAC
GCCGAAGCGC TGCGCTTCCT CTACGCCGGA CTCGACGATG CGAGGACACT TTCCCCCGGC
GAGGCGGACA TTCCGCCGGA TTCGGTGAGC CGGGCCGAAG TCGGGATGCT TCCGTTTGCG
GGGGTGGCCA GGATGGCCGT GGCGCGGGTG GGAGGCGACT TTGAATCCCG CCTGGACGCG
CTCGAAAAAG ATGTGCTCCC GCAAGGCTTC AAAGTGATCC AGGTTTCGCT CGGCCTCGGC
CGGCCGTGGA TCGATCGGGC GGTGAGCGCT CTGCGCGGCC GGGGCTACTT CCTCGGGGGT
GTCCTGCCGC GCTGGTTCGA TGAGGACGCG CTGCTTATGC AGAAAATCAT CGGAGACCCC
TGCTGGGAAG GCATCCGGCT GTTTTCGGAG AGGGCCGCGA AGATCCTCGA GCTTGTCCGC
GAAGACTGGA GAAGAACACA ATGA
 
Protein sequence
MNLAERVRRI EPEEHVLPSG EKMEVGLFRP EDGAGIGELF RTIYGDGYPA RHVYDPVELA 
AALERGDNYP VVARGPVGKI IGHVALFRSS PYGKLFEAGA GAVLPEHRNA GINRLLLAFA
YERLAPELEL EETWGEAVCN HIYMQRTIAT FNHVETALEV ALMPAEAYEK ERSAAGRVAS
VAVFRAYRPR PHVVRVPEAY AEALRFLYAG LDDARTLSPG EADIPPDSVS RAEVGMLPFA
GVARMAVARV GGDFESRLDA LEKDVLPQGF KVIQVSLGLG RPWIDRAVSA LRGRGYFLGG
VLPRWFDEDA LLMQKIIGDP CWEGIRLFSE RAAKILELVR EDWRRTQ