Gene Sfum_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2002 
Symbol 
ID4459703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2452161 
End bp2452931 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content60% 
IMG OID639702768 
Productamidohydrolase 2 
Protein accessionYP_846120 
Protein GI116749433 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0199491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCT CAGACATCAT CGACGCGCAC GCCCATTGCG GGCGACAGGA CAGAAGCCCT 
CCCCAGGCGT TGGAGGATTA CCTGGAACAC AGCCGGGGCA GCGGCATAGT CGGAGCGGTC
ATGTTTCCCC CGGTTTACGA GATCTACGAC CGCTATGATT ATTCGTTCGA GGACAATGAC
CACTGGCGCC GCAGGCGGGA TGCGGCGAAT CGCTACCTGA TCGAGCTGGA GACGCCTTTC
GAGGTCATTC CGTTCTATTT CGTCTGGAAT GATTTCGCCG TGGACAACAT CACCCCCTTG
CACAGAGGGA TCAAATGGCA TCGTCACTCG GATGAGCCGG AATACCATTA CGACGATCCG
CGGTGCCTGG CGGTGCTCTC GGAGATAAGA CGGCGCAACA TGCCGGTCGT CCTCGAGGAA
GAGTGGCACA AGACGACGAT GTTCATCGAC ACGCTCGCAT CCGGCATCAG GGTCGTCATT
CCCCACTGCG GACTGCTGAA CGGCGGATAC GAGAGATTCA GGCGGCAGGA CATATGGGGA
CACCCGGACA TCTACACGGA CACGTCCCTC GTGCCGGGTG AAGTGATCAC CGACTATGTG
GATCGGTACG GTTCGGAACG TATCATGTTC GGCTCGGATT TCCCGTTCGG CGATCCTCGC
CATGAGCTCG GGAAAATCAT GAGACTGCGG TTGGCGGACG CTGAAAAGGA GGCGCTCGTC
GGCGGCAATG TGAGGCGTTT GCTGGGCGGT GGAGGAGGGC GGGTCGGATG A
 
Protein sequence
MQPSDIIDAH AHCGRQDRSP PQALEDYLEH SRGSGIVGAV MFPPVYEIYD RYDYSFEDND 
HWRRRRDAAN RYLIELETPF EVIPFYFVWN DFAVDNITPL HRGIKWHRHS DEPEYHYDDP
RCLAVLSEIR RRNMPVVLEE EWHKTTMFID TLASGIRVVI PHCGLLNGGY ERFRRQDIWG
HPDIYTDTSL VPGEVITDYV DRYGSERIMF GSDFPFGDPR HELGKIMRLR LADAEKEALV
GGNVRRLLGG GGGRVG