Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2002 |
Symbol | |
ID | 4459703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2452161 |
End bp | 2452931 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639702768 |
Product | amidohydrolase 2 |
Protein accession | YP_846120 |
Protein GI | 116749433 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0199491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCT CAGACATCAT CGACGCGCAC GCCCATTGCG GGCGACAGGA CAGAAGCCCT CCCCAGGCGT TGGAGGATTA CCTGGAACAC AGCCGGGGCA GCGGCATAGT CGGAGCGGTC ATGTTTCCCC CGGTTTACGA GATCTACGAC CGCTATGATT ATTCGTTCGA GGACAATGAC CACTGGCGCC GCAGGCGGGA TGCGGCGAAT CGCTACCTGA TCGAGCTGGA GACGCCTTTC GAGGTCATTC CGTTCTATTT CGTCTGGAAT GATTTCGCCG TGGACAACAT CACCCCCTTG CACAGAGGGA TCAAATGGCA TCGTCACTCG GATGAGCCGG AATACCATTA CGACGATCCG CGGTGCCTGG CGGTGCTCTC GGAGATAAGA CGGCGCAACA TGCCGGTCGT CCTCGAGGAA GAGTGGCACA AGACGACGAT GTTCATCGAC ACGCTCGCAT CCGGCATCAG GGTCGTCATT CCCCACTGCG GACTGCTGAA CGGCGGATAC GAGAGATTCA GGCGGCAGGA CATATGGGGA CACCCGGACA TCTACACGGA CACGTCCCTC GTGCCGGGTG AAGTGATCAC CGACTATGTG GATCGGTACG GTTCGGAACG TATCATGTTC GGCTCGGATT TCCCGTTCGG CGATCCTCGC CATGAGCTCG GGAAAATCAT GAGACTGCGG TTGGCGGACG CTGAAAAGGA GGCGCTCGTC GGCGGCAATG TGAGGCGTTT GCTGGGCGGT GGAGGAGGGC GGGTCGGATG A
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Protein sequence | MQPSDIIDAH AHCGRQDRSP PQALEDYLEH SRGSGIVGAV MFPPVYEIYD RYDYSFEDND HWRRRRDAAN RYLIELETPF EVIPFYFVWN DFAVDNITPL HRGIKWHRHS DEPEYHYDDP RCLAVLSEIR RRNMPVVLEE EWHKTTMFID TLASGIRVVI PHCGLLNGGY ERFRRQDIWG HPDIYTDTSL VPGEVITDYV DRYGSERIMF GSDFPFGDPR HELGKIMRLR LADAEKEALV GGNVRRLLGG GGGRVG
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