| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1920 |
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| Symbol | |
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| ID | 4459757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2340832 |
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| End bp | 2341860 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639702687 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_846040 |
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| Protein GI | 116749353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.215161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00355923 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAACGACA CAACGGCAAA GACTCTCAAT TGCTCCCCGG CCTCCCGCGA CGGGTTCCCG
GAGACGCTCG GCGACTTCGG GCGCACGCGC GTCGACCTTC CCGTCGTCCT CGTGGCGGGC
CCCACCGGAG TGGGCAAGAC CGCGTTCGCC GTCGAGCTCG CCCGCGCCCT GGGCTCCGAG
ATCGTCAACG CCGACTCCAT GCAGGTCTAT CGGCACATGG ACATCGGCAC CGCCAAGCCC
ACCCCGCGGG AACGCTCGGC CGTTCCACAC CACCTGATCG ACATCGTCGA CCCCGATGAA
CCCTTCGATG CGGGCGACTA CCTGGCCCGG GCAAGACCCG TCATCGCGAC CCTGCACGAG
GCGGGCAAGG TCCCCATCGT CGTCGGCGGC ACGGGGCTCT ACCTCAAGGT TCTCACGCGC
GGCATCTGCG CGGGCGCTCC CGGCGATCCC GACGTGCGCC GACGGCTGAT CGAGGAGGAA
CTGACCCTCG GGCTTCCCGC TCTCCACGAG CGGCTGCGCG ACGTGGACCC GCCGCTCGGC
GCCCGCATCC ACCCCAACGA CCGCCAGCGC ATCCTCCGGG CGCTCGAAGT CTTTCACCAT
TCCGGCAAGC CGCTCTCTTA CTGGCAGCGG CAACACCGCT TCGAAGACGC TCCGTACCGG
ACGCTCAAGA TTTTCCTCCA CCGGCCGCGG GAAGTACTCT ACGCGCGCAT CAACGACCGG
GTGGACGCCA TGATGGCGCA GGGTTTCCTC GATGAGGTGC GAAACCTCCT CGCCATGGGC
TGCGGGCCGG AGCTCAAGCC CATGCAGTCG CTGGGCTACA GGCAAATGGC GCGCCATCTG
CGCGGGGAGA TGTCCCTGGA TGAGGCCGTG AACGAAATCC GGCGCGACAC CCGGCGCTAC
GCCAAGCGGC AGCTCACCTG GTTTCGCGCC GACCCGGAAT ACCGGTGGTT CGATGCCGCG
GACACGCACG GGCTTGTGGC CCGGATCGTG CGGGAAACCC CCGATCTTCA CGACAACCGG
TTACGGTAG
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| Protein sequence | MNDTTAKTLN CSPASRDGFP ETLGDFGRTR VDLPVVLVAG PTGVGKTAFA VELARALGSE
IVNADSMQVY RHMDIGTAKP TPRERSAVPH HLIDIVDPDE PFDAGDYLAR ARPVIATLHE
AGKVPIVVGG TGLYLKVLTR GICAGAPGDP DVRRRLIEEE LTLGLPALHE RLRDVDPPLG
ARIHPNDRQR ILRALEVFHH SGKPLSYWQR QHRFEDAPYR TLKIFLHRPR EVLYARINDR
VDAMMAQGFL DEVRNLLAMG CGPELKPMQS LGYRQMARHL RGEMSLDEAV NEIRRDTRRY
AKRQLTWFRA DPEYRWFDAA DTHGLVARIV RETPDLHDNR LR
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