Gene Sfum_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1896 
Symbol 
ID4459802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2314330 
End bp2314914 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content58% 
IMG OID639702663 
Producthypothetical protein 
Protein accessionYP_846016 
Protein GI116749329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000146374 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00355923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATCCA AGGAAAAGAT CGAGGAGCCT ATAGTTCTTC CCAAGCTGAA CATCCAGGAA 
ATGCGGATCA CGCTTATAGG GGATTCGCCG CTCATCTGTC ATGCGTGGTC TGAAAAGGCA
AAAAAGCAAA TATTGGACAA GCAGCAGAAA AAGGCGCGTC AGGCCAGGGC GGCAAAGGAT
CCTCAACGTG ATTTCGAAGA ATCGCTCTAT AGGCACCCGG AAGGGGGTTA CGGTTTCCCT
GCCGTTGCTT TCAAGGCGGC GGCCGTCGAT GCCTGTTCTC ATGTCGAAGG GATAACGAAG
GTCCAGGCCC GGGGGGCTTT TCATATCGTA GGCGAGCTGG CGAGGCTCGA CGGGGAGCCC
CGGATGCGGG CGGACATGGT CCGGGTGGGC CTCGGAACGG CCGATATCCG GATACGGGCG
GAATTTCCCG CGTGGTCGAC CACGTTGGAC ATCCGCTATA ACGGCAACGT GCTGTCGATG
GAACAGATCG CCAACCTTTT CAACACGGCC GGTTTCGCCG TCGGGGTCGG TGAATGGCGG
CCCCAGAAGG ACGGTTCCTA CGGCATGTTT CATGCCGAGG CGTGA
 
Protein sequence
MASKEKIEEP IVLPKLNIQE MRITLIGDSP LICHAWSEKA KKQILDKQQK KARQARAAKD 
PQRDFEESLY RHPEGGYGFP AVAFKAAAVD ACSHVEGITK VQARGAFHIV GELARLDGEP
RMRADMVRVG LGTADIRIRA EFPAWSTTLD IRYNGNVLSM EQIANLFNTA GFAVGVGEWR
PQKDGSYGMF HAEA