Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1896 |
Symbol | |
ID | 4459802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2314330 |
End bp | 2314914 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639702663 |
Product | hypothetical protein |
Protein accession | YP_846016 |
Protein GI | 116749329 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000146374 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00355923 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATCCA AGGAAAAGAT CGAGGAGCCT ATAGTTCTTC CCAAGCTGAA CATCCAGGAA ATGCGGATCA CGCTTATAGG GGATTCGCCG CTCATCTGTC ATGCGTGGTC TGAAAAGGCA AAAAAGCAAA TATTGGACAA GCAGCAGAAA AAGGCGCGTC AGGCCAGGGC GGCAAAGGAT CCTCAACGTG ATTTCGAAGA ATCGCTCTAT AGGCACCCGG AAGGGGGTTA CGGTTTCCCT GCCGTTGCTT TCAAGGCGGC GGCCGTCGAT GCCTGTTCTC ATGTCGAAGG GATAACGAAG GTCCAGGCCC GGGGGGCTTT TCATATCGTA GGCGAGCTGG CGAGGCTCGA CGGGGAGCCC CGGATGCGGG CGGACATGGT CCGGGTGGGC CTCGGAACGG CCGATATCCG GATACGGGCG GAATTTCCCG CGTGGTCGAC CACGTTGGAC ATCCGCTATA ACGGCAACGT GCTGTCGATG GAACAGATCG CCAACCTTTT CAACACGGCC GGTTTCGCCG TCGGGGTCGG TGAATGGCGG CCCCAGAAGG ACGGTTCCTA CGGCATGTTT CATGCCGAGG CGTGA
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Protein sequence | MASKEKIEEP IVLPKLNIQE MRITLIGDSP LICHAWSEKA KKQILDKQQK KARQARAAKD PQRDFEESLY RHPEGGYGFP AVAFKAAAVD ACSHVEGITK VQARGAFHIV GELARLDGEP RMRADMVRVG LGTADIRIRA EFPAWSTTLD IRYNGNVLSM EQIANLFNTA GFAVGVGEWR PQKDGSYGMF HAEA
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