| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1831 |
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| Symbol | |
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| ID | 4459842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2234373 |
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| End bp | 2235860 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702598 |
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| Product | ribonuclease |
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| Protein accession | YP_845951 |
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| Protein GI | 116749264 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0301322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAA CCATGATCAT CAATGCAATA CATCCTGAGG AATTTCGCGT CGCTCTTATG
GAAGGCCAGA CACTGGAAGG TTTTTTCATT GAAACGGCCA CACGCGGAAA AGTTGTCGGC
AACATCTACA AGGGCATCGT CACCCACGTT CAGCCCAGTC TCCAGGCCGC TTTCGTCAAC
TACGGGATGG AGCGCAACGG CTTTCTTCCC TTCCCCGAGA TCCACCCCGA GTACTACGAA
GAGGACTCGG ACGAAAGGGT GCGCATCCAG GATGTGATCC ATTCGGGACA AGAGGTCCTG
GTCCAGGTCG TCAAGGAAGA GCTCGGGAGC AAGGGTGCTC TGCTGACCAC CTATATCTCG
CTGGCGGGGC GCGATGTTGT CTTGATGCCG GGTCAGAGTC AACGCGGAGT ATCCCGAAAG
ATCGAGGACG GAGGCCAGCG CGAACGTCTC AAGGAACTGG CGGGCGATTT GAAGGTCCCG
GAAGAATTCG GGGTGATCCT TCGAACGGCG GCCGAGGGAC GAACCAAGCG GGAGGTAACC
AAGGACTTCA ATCACCTCAT GAAGATCTGG GAAGAGATCA GGAAACACGT CCAGGAGACT
CCCGCGCCCG CGCTCATTTA CAAGGAACAG GACCTGGCGG TTCGCGTGAT CCGGGACTAC
TTCAATCCGA ACATCAAGAC CATCCTGGTG GACGACCGGG AAGTCCTCAA ACAGGTCAAG
GATTTCATTC GCATCATCAG CCCCAGGCAT GACCGGGTCG TGCGGTTTTA CAAGGAAGAC
GGGCCGATCA CCGGCAAGTA CAATCTCGAA GAGCAGATCG CCCAGATCTT CCGCAAGAAG
GTTCCTCTCA AGTCCGGGGG CCACCTGGTT ATCGACCCCA CCGAAGCCCT GGTGGCCGTC
GACGTGAATT CGGGCCGCAC CAACAGCGGC GAGGGGGCGC TCGAGGAGAT GGTCTTCAAG
GTCAACATGG AGGCCGCCGC GGAAATCCCG CGGCAGCTGC GCCTGAGGGA TCTCGGAGGA
CTTATCGTCA TCGACTTCAT CGATATGCGC GACAACCGCC ACACTCGCGA GGTGGAACGG
CGTCTCAAGG AAGAGATCAA GAAGGACAAA GCCAAAATCA CCGTCGGCCG GATTTCTCGC
TTCGGGCTGC TGGAGCTCTC CCGTCAGCAT CTCGGGCTGA ACATCATGCG GGGCTCCTAC
AAGGAATGCC CGCTGTGCCA GGGCGCCGGC ATGGTTCGTT CGGCGGAAAC GACGGCGTTG
TGCTACTTGC GCAAGATCTG GCTCACCCTG TCTCAGAAAA AGCCGGCTTC GGTCCGGGCC
ACCTTCGCTC CGGAAGTCGC GCATTACCTG CTCAACCGCA AGAGACAGGA ACTCACGCGC
CTCGAGGAGC GCTACGGCAC CAACATCCAG ATCGAATCCC TCGCCACCAT GCTGCCGCAC
GACGGACACC TCGAATTCAC CGCCCGGGAG ACCCAGGAGA AACCGTAG
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| Protein sequence | MSQTMIINAI HPEEFRVALM EGQTLEGFFI ETATRGKVVG NIYKGIVTHV QPSLQAAFVN
YGMERNGFLP FPEIHPEYYE EDSDERVRIQ DVIHSGQEVL VQVVKEELGS KGALLTTYIS
LAGRDVVLMP GQSQRGVSRK IEDGGQRERL KELAGDLKVP EEFGVILRTA AEGRTKREVT
KDFNHLMKIW EEIRKHVQET PAPALIYKEQ DLAVRVIRDY FNPNIKTILV DDREVLKQVK
DFIRIISPRH DRVVRFYKED GPITGKYNLE EQIAQIFRKK VPLKSGGHLV IDPTEALVAV
DVNSGRTNSG EGALEEMVFK VNMEAAAEIP RQLRLRDLGG LIVIDFIDMR DNRHTREVER
RLKEEIKKDK AKITVGRISR FGLLELSRQH LGLNIMRGSY KECPLCQGAG MVRSAETTAL
CYLRKIWLTL SQKKPASVRA TFAPEVAHYL LNRKRQELTR LEERYGTNIQ IESLATMLPH
DGHLEFTARE TQEKP
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