Gene Sfum_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1803 
Symbol 
ID4459881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2200108 
End bp2200311 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content58% 
IMG OID639702570 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_845923 
Protein GI116749236 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.538319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CGTTCGAACC AAGAATCGTC GCTTTTCTCT GTAACTGGTG TGCGTACGCA 
GGGGCGGATC TGGCCGGGGT GGGGCGCATG CAGTATCCCA CCAACGTTCG CCTGATCCGC
CTGATGTGCA CCGGAAGAAT GAACCATGGT TTCCTGCTCA ATGCCTACAA GGCGGGGGCG
GATGGAGTGA TGGTGTCCGG GTGA
 
Protein sequence
MSDSFEPRIV AFLCNWCAYA GADLAGVGRM QYPTNVRLIR LMCTGRMNHG FLLNAYKAGA 
DGVMVSG