Gene Sfum_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1730 
Symbol 
ID4459947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2115390 
End bp2117570 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content63% 
IMG OID639702499 
Productaldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 
Protein accessionYP_845852 
Protein GI116749165 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.178577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGATCTCCCG ACGCGAATTC CTGCGGAAAA CGCTTGCCGG AGCCGGCTTT 
GCAGTGGCCG TCTCGCTGAA GCCGTTCGTC TGTGAGGTCT GGCCTCAGCA ACGGCGCGCG
CGGGAGGAGG TCGAGATCTT CAGCCCCGCC GCCTGGGTAC AGGTCACTTC CGACAACCTG
GTGACGGTCA TCGTGAACAA GTCTGAAATG GGCCAGGGCG TGACGACGAG CCTGCCAATG
ATCGTTGCCG AGGAGCTCGA TGCCGATTGG GACCAGGTGC GGTTCGAGAT CGCTCCCGCC
CGGGAACGGT ACCTCGATCC CGTGTCCGGA CGGCAGTATA CGGGTGGAAG CACCAGTGTC
CGCCAAATGA TCGCGCCTCT CCGGACCGCG GGCGCAATCG CCCGTGAGAT GTTGCTGCGG
GCCGCCGCCG AGACGTGGAA AGTGCCCGCC GCTTCCTGCG CGGTCGTCAA AGGCACGGTC
AGGCACCAGG TGAGCGGCCG CAGCCTGACC TTCGGCGAGC TCTGCAGGCA GGCCGCCCGG
TTGCCCGTGC CGAGGCAACC CGCAATCAAG TCCAAATCCC CGCAAAGAAT CGTCGGCTCC
TCAGTTTCGC GTCTGGACAT CCTCGACAAG ATTGAAGGTT CCGCCGTGTT CGGCATGGAC
GTCTTCGTCA ACGACATGCT CCACGCCAGC ATCGCCCGCC CTCCGGCATT CGGAGCAAAA
CCCCTGGCCT TCGACCGCGA AGCGGCCGGG AAAGTGCGCG GAGTGCGGCA AGTCGTCCCG
ATGGAACGCG GGATCGCCGT TTGCGCCGAT CATCTGCATC AGGCCTGGGC CGGGAAAAAG
GCTTTGAACG TCAGGTGGAG CAGGGGGTCC CACCCCGAAC TGAACACCGC GGGCGTGGAA
AACCGTCTTC TCCCCCTCCT CAACAAACCG GGAGCAACCG CGCATTCCAC GGGCGACTGC
GGTCCGGCCC TCGGCGCCGC ATCCAGAAAG CTCAGGGCAC ACTACACCCT TCCCTTCCTT
GCCCACGCGA CAATGGAGCC CATGAACTGC ACCGCTCACG TCCGCGCAGA GGGCTGCGAC
ATCTGGGCGC CCGTTCAAGA TCAGACCGGC GCCGTCGATA CTGCTTGCGC CATAACGGGT
CTGCGCCCCG ACCAGGTTCT CGTCTATACG ACCTACCTGG GAGGCGCCTT CGGCAGAAGG
CTCGAAACGG ACTTCGTTGC AGAAGCGGTG CAGCTGTCCA AGGTTGTTCA AAAGCCGGTG
AAAGTCGTAT GGACCCGGGA AGAAGACCTG CAAAATGATT TCTACCGCCC GGCCTGTGCC
TGCCGCATTG AAGCGGGCCT GGACGCGGGC GGGCATATTG CGGCCTGGAG GCACAAGATC
GCCGCTTCTT CGATCCTCGA ACGGATCGCT CCCGATCAGG TTTCGGACGG CGTGGATCCG
TTCGCTGTCC AGGGCCTGAC TGATATGCCC TATGAAATCC CCAATCTCGA AGTGGAGTAC
GTCAAAGCCG ATCTTCCTGT ACCGGTCGGC TTCTGGAGGT CGGCGGGCTA TTCGTACAAT
ACGTTCGCGG TCGAAAGCTT CATGGATGAG CTCGCCCGCG CCGCGGGGAA GGATCCCGTT
GAATTTCGGC TTGCCCATCT GAAGAAAAAC GCCCGCGCCA CACGCCTGAT CGAAGAGCTC
GTCAAGAGCT CCGGGTGGGG GCGGCATCCC CGGAAAGGGA TTGGAAAGGG GTTCGCCTAT
CATTCATCGC ACGGCACTCA CGTGGCCCAG GTGGCCGAAG TGGCCGCCGA TGAAAAGAAG
GGCGCCTTGA AAATCCTCAA GGTCACCTGC GCCGTGGACT GCGGCACGGT CATCAGCCCG
GACGCGGTGG CGGCCCAGAT GGAAGGCGGC ATTATTTTCG GTTTGAGCGC GGCGTTGAAA
GAAGAGGTCG AATTCACGAA CGGCGGTGTG GCAAGCCACA ATTTCTCCGG ATACGAGATC
CTCGCAGCCG ATGAAACCCC GGAAATCGAA ATACTCATGC TCCCTTCCGG CGGCACTCTG
GGCGGCATCG GAGCGGTCGG CGTCCCGGCC GTGGCTCCGG CCATCGCCAA CGCCGCGTTC
AACCTGACCG GGTCGAGGAT CAGGAAGCTT CCGCTCAGGG CGCGCGGCGC GCGGGGACGC
GCGCGCGCGA AGAATCCGTG A
 
Protein sequence
MTATISRREF LRKTLAGAGF AVAVSLKPFV CEVWPQQRRA REEVEIFSPA AWVQVTSDNL 
VTVIVNKSEM GQGVTTSLPM IVAEELDADW DQVRFEIAPA RERYLDPVSG RQYTGGSTSV
RQMIAPLRTA GAIAREMLLR AAAETWKVPA ASCAVVKGTV RHQVSGRSLT FGELCRQAAR
LPVPRQPAIK SKSPQRIVGS SVSRLDILDK IEGSAVFGMD VFVNDMLHAS IARPPAFGAK
PLAFDREAAG KVRGVRQVVP MERGIAVCAD HLHQAWAGKK ALNVRWSRGS HPELNTAGVE
NRLLPLLNKP GATAHSTGDC GPALGAASRK LRAHYTLPFL AHATMEPMNC TAHVRAEGCD
IWAPVQDQTG AVDTACAITG LRPDQVLVYT TYLGGAFGRR LETDFVAEAV QLSKVVQKPV
KVVWTREEDL QNDFYRPACA CRIEAGLDAG GHIAAWRHKI AASSILERIA PDQVSDGVDP
FAVQGLTDMP YEIPNLEVEY VKADLPVPVG FWRSAGYSYN TFAVESFMDE LARAAGKDPV
EFRLAHLKKN ARATRLIEEL VKSSGWGRHP RKGIGKGFAY HSSHGTHVAQ VAEVAADEKK
GALKILKVTC AVDCGTVISP DAVAAQMEGG IIFGLSAALK EEVEFTNGGV ASHNFSGYEI
LAADETPEIE ILMLPSGGTL GGIGAVGVPA VAPAIANAAF NLTGSRIRKL PLRARGARGR
ARAKNP