| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1694 |
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| Symbol | |
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| ID | 4459981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2071422 |
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| End bp | 2072591 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702463 |
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| Product | twitching motility protein |
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| Protein accession | YP_845816 |
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| Protein GI | 116749129 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.12412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAGAG CGGACTTGGA TTTTCTTCTG GGCCACATGC TGGATCAATA TCCGCGGGCC
TCAGACATCA ATCTCACGGT CGGAAAACCC CCTCAGGTCG AGGTTGACGG GGTTCTCATG
CCAACCTGCC AGGATTTGGG ACTCAGCAAG CTGACACCGT TCCATACGGA AATGGTCATG
CTCAATCTTG CGGGGGGAGA CCGGCGCAAC CTGCAGAATC TTCTCAACCA CGGCTCATGC
GACCTGTCCT ATCACCTGCC CGGAAGAGCG CGCTTCCGAG TCAACGTCTT TTCGCAGCGC
GGAACCTACT CCGTCGTCAT GCGCCAGCTG CCCACCCAGG TGCCTACGAT CGATGAGCTG
AAACTGCCGC TTGTGCTCAA ACAGGTGGCC GAGGAGAAAT TCGGCATCGT GTTCGTAACG
GGGGCCACCG GAAGCGGGAA AACCACGACT CTGGCCGCCA TGCTGAGTGA AATCAACCAG
AAGAAGTCCT ATCACATCAT TACGCTCGAA GACCCGGTGG AGTACGTGCA TCCACAGCTG
CAGTCCACAT TCAATCAGAG GGAGCTCGGG CTGGACTTCG ACGCATTTGC CAACGGCCTC
AGGGCTGCAC TTCGCCAGGC GCCGAAAGTC ATCCTGGTCG GCGAGATGCG CGACCGGGAG
ACGGTGGAAA TCGGATTGAG CGCGGCGGAA ACCGGCCATC TGGTGCTCAC GACCCTCCAC
ACCATCGATG CCGGTCAGAC CATCAACCGC ATTATCGGCA TGTTCGAGCT GGAAGAGGAA
CGGCTGATCC GTATCCGCCT GGCGGATACC ATGCGCTGGG CGATTTCCCA GCGGCTGCTT
CCGAAGGTCG GGGGAGGCCG GATTGCGGCC ATGGAAGTGA TGGGATCGAA CCTGCGCGTC
AAGGAAGCCA TCATCAACGG CGAAGCGGAG GGCAAGACGT TCTACGAAAT GATGCAGCAG
GGCAAGCCGT TCGGCTGGAC GACCTTCGAC GACTGGATCA TCGGTCTGTA CAGGCAGGGA
GAAATTACCG AGGACACTGC CAAGGCCTAC GCTTCCAAGA GAGCCATCGT AAAGCGCGGA
ATCGACGACA TAAGAGCTGC CCGTGGTGAG AAGACGTCGG ACATCGACGG GCTCAGAATC
GACCGCGACT ACGCAGGGAG CATCGATTGA
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| Protein sequence | MKRADLDFLL GHMLDQYPRA SDINLTVGKP PQVEVDGVLM PTCQDLGLSK LTPFHTEMVM
LNLAGGDRRN LQNLLNHGSC DLSYHLPGRA RFRVNVFSQR GTYSVVMRQL PTQVPTIDEL
KLPLVLKQVA EEKFGIVFVT GATGSGKTTT LAAMLSEINQ KKSYHIITLE DPVEYVHPQL
QSTFNQRELG LDFDAFANGL RAALRQAPKV ILVGEMRDRE TVEIGLSAAE TGHLVLTTLH
TIDAGQTINR IIGMFELEEE RLIRIRLADT MRWAISQRLL PKVGGGRIAA MEVMGSNLRV
KEAIINGEAE GKTFYEMMQQ GKPFGWTTFD DWIIGLYRQG EITEDTAKAY ASKRAIVKRG
IDDIRAARGE KTSDIDGLRI DRDYAGSID
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