Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1670 |
Symbol | |
ID | 4460042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2047751 |
End bp | 2050021 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639702439 |
Product | organic solvent tolerance protein |
Protein accession | YP_845792 |
Protein GI | 116749105 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0107497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATT CCAGACACCT CGCAATGTGT GCGGTTCTCT TCACCGTGGT TGCCTCGGTT CTCCACATGA TCGCGGTTCC CTGCGCTGCC GAGCCAAAGA GCGTCACAAC CCTCGGATTC AGCCGCGAAA GCTTTCTGGG AACCGTCCAG GGGACATGGA GAATCGAAGC CGGGAGCATT GCCTACGACC AGTCCAAACA GGTCTACACG GCGGAGGGCG GCGTTCGGAT CACATCGCAT GAACGTGTCA TCCAGGCCGA CTGGGCCACC GTGGACATGG AAAAGAGGCA GGCGGAACTG CGCGGACATG TATTTCTCCA GTACGGAAGG AACTGGCTGA AGGGCGAATA CGTTCTATGG AACCTGGACA TGGAAACGGG GTGGCTGGAC GGCGGTCTCA TCTATTTTGC CGAGAATCAG TTGTACGCGG AGGGGAAATA CATCACCAAG ATCGGTCCCC ACCAGTTCGA AATGAAGGAA GGCTTTCTGA CGAGCTGCGA TCCGGCCAAT TCGGACTGGA AAATCAAGTA CGACGAAATG AACGTCAATT TGAACGGTTT TGCCTGGGCT ACCCACACCT CTTTCTGGAT CAGGGATTTT CCCGTCTTCT ACTCTCCCTA TATCGCGCTT CCGGTGGACC AGAGGAGACA GTCCGGGTTC CTGCTGCCCT GGGCCGGTTA CTCCAAGCTG GATGGAGCGG ATTTTGAGAT TCCGTTCTAT TGGGCGATGC GGGGGGACAT GGACGCGACG CTTTTCGCCC GTTACATGGA GAAGCGCGGC TTCATGGCCG GCGCCGAGTA TCGCATCAAT CACCGGACAT GGGGCGAAGG GGTCTGGGCG GTCAACTATT TGCGGGACCA GGCCGACAAG GACTTCCTGT TCGACCAGGG CTACCCTTTC CAGACCCGGG ACCGTTACTG GGTGAGGGCC AGGCACAATT TCGATTTGCC GGGGGAAATC GAGGCGCGTT TGAACCTCGA CTACGTGAGC GACCGGAATT TTCTCCAGGA GTTCACGAAA GGATCGGTCT CCTATGACTA TTCCAACAAG GTGTTTCGCG ACTACTTCGG ACGCGGCATA CTCGACGACA AAACGTCCTT GACGCGTGAA TCCGCTTTGT ACCTGGACAA GAGGACGGAG TCGACACTGG TCGGCCTGGA CATCCGCTAT TGGGAACAGC TTGACGATTC CCGGGACGAA TTCACGTTCG AGCGGCTGCC TGCGGTATCG TTCAATGTCA TCCCGTCCTG GATCGAGCGG TTGCCGGTCT ATTACACGTT CGACAGCTCG CTGGTCAACT ACTGGCGCAG GGAAGGCTAC AAAGGGGACC GCCTGGACGT GTATCCGCGC GTCCACTACC CGATGCACTA CAAGAACTAC ATTGACATCG AGCCTTCGGT GGGGATGCGC GCCTCCTCGT ACTGGGTCGA CTGGGGGGGC GACAGCTCTC TCAACCAGTT GCAGGGGAGG TTCCTGACCG ATGTGCGGAT GGACATGAGC ACGCGGCTGA ATCGGGTGTA TCCGATCAAG ATCGGCGACT ATGTGGCGCT GGAGCACGCC ATACGGCCCG AGGTCGTGTA TGAGTACGTC CCGGAGGCCA TCCAGGGAGA CATCCCGCGG TTCGATCGAC TGGACCAGGA TCAGGCGAGA AACGCCTTGC GATACGGGTT CACCACGTTC CTCACGGCCA AGGAGGTTCG GCAGGATTCC GAAGGGAATT CGGTCACAAG CTATCGTGAA TTCGCGCGGT TGAAGTTGTA CCAGCTGTTC AACATCGAAG ACCCGCCGCC CGACGAAGCA TTTTTCAATT TCGGCGAGGA GCAGGGGTTC ACATCCGTGG GAATGCGGAT CGACCTCATG CCGAAGCGCT ACCTCACGCT GTCCTACGAT GCCAATCTTT ATTCGGACTC ACCCAACGGC TACCACCAGG ATTTCCTGCT GACCCTGGAC GATGGGAAAG GCCACGCGGT GCGGTTCGAC TACCAGTTCC GCGAGGACAT GCCCGTCAAC GAGCTGACCA CGGAAATCGT GTTCAAGACG TTTTCAAACC TGTATTTGAA CACGTACCAT GATTACTCCT TCGACCAGGG CACGATTTAC AAGCAAGGCT ACGGGATAAA GTACCTGCGC GGATGCTGGG CCCTCGGCGT GGCCTTTGAG AAGGAAGACA ACGACGAGCG GGTGATCGTT TCGCTCAACC TGCTCGGTCT GGGCAACCTG GTGGGCAGTT TCGGCTACAA GACGGGAGAG AGTCCCTCCG GTCTGCCGTG A
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Protein sequence | MSHSRHLAMC AVLFTVVASV LHMIAVPCAA EPKSVTTLGF SRESFLGTVQ GTWRIEAGSI AYDQSKQVYT AEGGVRITSH ERVIQADWAT VDMEKRQAEL RGHVFLQYGR NWLKGEYVLW NLDMETGWLD GGLIYFAENQ LYAEGKYITK IGPHQFEMKE GFLTSCDPAN SDWKIKYDEM NVNLNGFAWA THTSFWIRDF PVFYSPYIAL PVDQRRQSGF LLPWAGYSKL DGADFEIPFY WAMRGDMDAT LFARYMEKRG FMAGAEYRIN HRTWGEGVWA VNYLRDQADK DFLFDQGYPF QTRDRYWVRA RHNFDLPGEI EARLNLDYVS DRNFLQEFTK GSVSYDYSNK VFRDYFGRGI LDDKTSLTRE SALYLDKRTE STLVGLDIRY WEQLDDSRDE FTFERLPAVS FNVIPSWIER LPVYYTFDSS LVNYWRREGY KGDRLDVYPR VHYPMHYKNY IDIEPSVGMR ASSYWVDWGG DSSLNQLQGR FLTDVRMDMS TRLNRVYPIK IGDYVALEHA IRPEVVYEYV PEAIQGDIPR FDRLDQDQAR NALRYGFTTF LTAKEVRQDS EGNSVTSYRE FARLKLYQLF NIEDPPPDEA FFNFGEEQGF TSVGMRIDLM PKRYLTLSYD ANLYSDSPNG YHQDFLLTLD DGKGHAVRFD YQFREDMPVN ELTTEIVFKT FSNLYLNTYH DYSFDQGTIY KQGYGIKYLR GCWALGVAFE KEDNDERVIV SLNLLGLGNL VGSFGYKTGE SPSGLP
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