Gene Sfum_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1670 
Symbol 
ID4460042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2047751 
End bp2050021 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content57% 
IMG OID639702439 
Productorganic solvent tolerance protein 
Protein accessionYP_845792 
Protein GI116749105 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0107497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATT CCAGACACCT CGCAATGTGT GCGGTTCTCT TCACCGTGGT TGCCTCGGTT 
CTCCACATGA TCGCGGTTCC CTGCGCTGCC GAGCCAAAGA GCGTCACAAC CCTCGGATTC
AGCCGCGAAA GCTTTCTGGG AACCGTCCAG GGGACATGGA GAATCGAAGC CGGGAGCATT
GCCTACGACC AGTCCAAACA GGTCTACACG GCGGAGGGCG GCGTTCGGAT CACATCGCAT
GAACGTGTCA TCCAGGCCGA CTGGGCCACC GTGGACATGG AAAAGAGGCA GGCGGAACTG
CGCGGACATG TATTTCTCCA GTACGGAAGG AACTGGCTGA AGGGCGAATA CGTTCTATGG
AACCTGGACA TGGAAACGGG GTGGCTGGAC GGCGGTCTCA TCTATTTTGC CGAGAATCAG
TTGTACGCGG AGGGGAAATA CATCACCAAG ATCGGTCCCC ACCAGTTCGA AATGAAGGAA
GGCTTTCTGA CGAGCTGCGA TCCGGCCAAT TCGGACTGGA AAATCAAGTA CGACGAAATG
AACGTCAATT TGAACGGTTT TGCCTGGGCT ACCCACACCT CTTTCTGGAT CAGGGATTTT
CCCGTCTTCT ACTCTCCCTA TATCGCGCTT CCGGTGGACC AGAGGAGACA GTCCGGGTTC
CTGCTGCCCT GGGCCGGTTA CTCCAAGCTG GATGGAGCGG ATTTTGAGAT TCCGTTCTAT
TGGGCGATGC GGGGGGACAT GGACGCGACG CTTTTCGCCC GTTACATGGA GAAGCGCGGC
TTCATGGCCG GCGCCGAGTA TCGCATCAAT CACCGGACAT GGGGCGAAGG GGTCTGGGCG
GTCAACTATT TGCGGGACCA GGCCGACAAG GACTTCCTGT TCGACCAGGG CTACCCTTTC
CAGACCCGGG ACCGTTACTG GGTGAGGGCC AGGCACAATT TCGATTTGCC GGGGGAAATC
GAGGCGCGTT TGAACCTCGA CTACGTGAGC GACCGGAATT TTCTCCAGGA GTTCACGAAA
GGATCGGTCT CCTATGACTA TTCCAACAAG GTGTTTCGCG ACTACTTCGG ACGCGGCATA
CTCGACGACA AAACGTCCTT GACGCGTGAA TCCGCTTTGT ACCTGGACAA GAGGACGGAG
TCGACACTGG TCGGCCTGGA CATCCGCTAT TGGGAACAGC TTGACGATTC CCGGGACGAA
TTCACGTTCG AGCGGCTGCC TGCGGTATCG TTCAATGTCA TCCCGTCCTG GATCGAGCGG
TTGCCGGTCT ATTACACGTT CGACAGCTCG CTGGTCAACT ACTGGCGCAG GGAAGGCTAC
AAAGGGGACC GCCTGGACGT GTATCCGCGC GTCCACTACC CGATGCACTA CAAGAACTAC
ATTGACATCG AGCCTTCGGT GGGGATGCGC GCCTCCTCGT ACTGGGTCGA CTGGGGGGGC
GACAGCTCTC TCAACCAGTT GCAGGGGAGG TTCCTGACCG ATGTGCGGAT GGACATGAGC
ACGCGGCTGA ATCGGGTGTA TCCGATCAAG ATCGGCGACT ATGTGGCGCT GGAGCACGCC
ATACGGCCCG AGGTCGTGTA TGAGTACGTC CCGGAGGCCA TCCAGGGAGA CATCCCGCGG
TTCGATCGAC TGGACCAGGA TCAGGCGAGA AACGCCTTGC GATACGGGTT CACCACGTTC
CTCACGGCCA AGGAGGTTCG GCAGGATTCC GAAGGGAATT CGGTCACAAG CTATCGTGAA
TTCGCGCGGT TGAAGTTGTA CCAGCTGTTC AACATCGAAG ACCCGCCGCC CGACGAAGCA
TTTTTCAATT TCGGCGAGGA GCAGGGGTTC ACATCCGTGG GAATGCGGAT CGACCTCATG
CCGAAGCGCT ACCTCACGCT GTCCTACGAT GCCAATCTTT ATTCGGACTC ACCCAACGGC
TACCACCAGG ATTTCCTGCT GACCCTGGAC GATGGGAAAG GCCACGCGGT GCGGTTCGAC
TACCAGTTCC GCGAGGACAT GCCCGTCAAC GAGCTGACCA CGGAAATCGT GTTCAAGACG
TTTTCAAACC TGTATTTGAA CACGTACCAT GATTACTCCT TCGACCAGGG CACGATTTAC
AAGCAAGGCT ACGGGATAAA GTACCTGCGC GGATGCTGGG CCCTCGGCGT GGCCTTTGAG
AAGGAAGACA ACGACGAGCG GGTGATCGTT TCGCTCAACC TGCTCGGTCT GGGCAACCTG
GTGGGCAGTT TCGGCTACAA GACGGGAGAG AGTCCCTCCG GTCTGCCGTG A
 
Protein sequence
MSHSRHLAMC AVLFTVVASV LHMIAVPCAA EPKSVTTLGF SRESFLGTVQ GTWRIEAGSI 
AYDQSKQVYT AEGGVRITSH ERVIQADWAT VDMEKRQAEL RGHVFLQYGR NWLKGEYVLW
NLDMETGWLD GGLIYFAENQ LYAEGKYITK IGPHQFEMKE GFLTSCDPAN SDWKIKYDEM
NVNLNGFAWA THTSFWIRDF PVFYSPYIAL PVDQRRQSGF LLPWAGYSKL DGADFEIPFY
WAMRGDMDAT LFARYMEKRG FMAGAEYRIN HRTWGEGVWA VNYLRDQADK DFLFDQGYPF
QTRDRYWVRA RHNFDLPGEI EARLNLDYVS DRNFLQEFTK GSVSYDYSNK VFRDYFGRGI
LDDKTSLTRE SALYLDKRTE STLVGLDIRY WEQLDDSRDE FTFERLPAVS FNVIPSWIER
LPVYYTFDSS LVNYWRREGY KGDRLDVYPR VHYPMHYKNY IDIEPSVGMR ASSYWVDWGG
DSSLNQLQGR FLTDVRMDMS TRLNRVYPIK IGDYVALEHA IRPEVVYEYV PEAIQGDIPR
FDRLDQDQAR NALRYGFTTF LTAKEVRQDS EGNSVTSYRE FARLKLYQLF NIEDPPPDEA
FFNFGEEQGF TSVGMRIDLM PKRYLTLSYD ANLYSDSPNG YHQDFLLTLD DGKGHAVRFD
YQFREDMPVN ELTTEIVFKT FSNLYLNTYH DYSFDQGTIY KQGYGIKYLR GCWALGVAFE
KEDNDERVIV SLNLLGLGNL VGSFGYKTGE SPSGLP