| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1620 |
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| Symbol | |
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| ID | 4460089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1980224 |
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| End bp | 1981555 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702389 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_845742 |
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| Protein GI | 116749055 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAACCG GACCATTCCA TCTCTTCCTG CTGCTGGTGG GCTGTGTTGC GGGATTGGCT
GCAATTGCGC CCGTGCATGA GCCAATGGCC GCAGAGGCAG GCCCCCAGGA GAACTACGGG
CGCACGCCGC GTGAATACCT CCCGTACAAC CGGTTCACGG AGCCTTACAA GCGCTTCTTC
ATGGTTCCCA ACGAATACCG CGGATACGGC CGCAGCCTTC CGGAACCCGA GCGCGTGGAA
AGTGTCCGGA TCGGTTTCCT CGGCCCCATC ACAAAGACCG TTTCCGTTGC AACGGGTGGA
GTTTCCCACG AGGAACCACT GGGTCACAAG ATGCTCCAGG GCGCACAGCT CGCCATCGAA
CAGGCCAACG CGAAGAACGG GTTTCGCGGG AGCGGGATTC CGTATGAACT GATGGTTCGA
AACGACAACG GGCTCTGGGG AGCCAGCGGC AGCGAGATCA TCCACCTTGC CTACCGGGAC
AACGTCTGGG CGATCCTCGG GACCATCGAC GGCGCCAACA GTCACATAGC CATTCGCGTG
GCCCTGAAGA TCGAGATCCC GATGATGAAC ACGGGAGACA CCGACCCGAC GTTCATCGAA
ACCGCGATCC CATGGGTTTT TCGATGCATC ACCGACGACC GGCAGATGTG CTATCTGCTG
GCCGACTACG TGTTCAAGAA GCTGAAACTG ACGCGGGTTG CGGCCCTGCG CGCCAACAAT
CGCTACGGGC GCATAGGCAT CGGCGAATTC AGGGACGCCG CCACTCGTCT GGGCCACCCT
TTCATTGCCG AACTGAACTA CCAGGTCGGC GACAGGGATT TCGCCCCGCA ACTCGAGCGG
ATCCAAGCCG TTGACCCCGA AGTGCTGATC ACATACGGAG ACGCCGCGGA ATCGGCCCTT
ATCCTGAAAC AGATGCGTGC GATGGGCATG AGCCAGTGGC TCATAGGAAG CGATCGCATG
GTGTCCGCCG AGTTCCTGAG CAGTGCGGGA AAAGAGGAGG AACGGGTCGC CGCCCCTTGC
CCGTACAACC CCCGAAGCGA CGATCCGGGA TACCTGAAAT TCAAGCGCGA TTTTACGGAG
CGTTTCGGGG AAGAGCCCGA ATCCTTTGCG GCTCATGCCT ATGATGGAAT GAACATGACC
ATCGAGGCGA TCGAGAAAGC CGGGCTGAAC CGGGCGAAGA TCCGCGACGC CCTTGCCGAA
GTGAAGACTT ACCGGGGAGT CACGGGCGTC AAGGAATTCG ATGTCGTATT GAACAATATC
AGCCCGCCTT ATCTGGCCGT CCTGAAAGAT GGGCAATTTC TCTTCCACTC GCGTGACGAG
GTGCTCAAAT GA
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| Protein sequence | MRTGPFHLFL LLVGCVAGLA AIAPVHEPMA AEAGPQENYG RTPREYLPYN RFTEPYKRFF
MVPNEYRGYG RSLPEPERVE SVRIGFLGPI TKTVSVATGG VSHEEPLGHK MLQGAQLAIE
QANAKNGFRG SGIPYELMVR NDNGLWGASG SEIIHLAYRD NVWAILGTID GANSHIAIRV
ALKIEIPMMN TGDTDPTFIE TAIPWVFRCI TDDRQMCYLL ADYVFKKLKL TRVAALRANN
RYGRIGIGEF RDAATRLGHP FIAELNYQVG DRDFAPQLER IQAVDPEVLI TYGDAAESAL
ILKQMRAMGM SQWLIGSDRM VSAEFLSSAG KEEERVAAPC PYNPRSDDPG YLKFKRDFTE
RFGEEPESFA AHAYDGMNMT IEAIEKAGLN RAKIRDALAE VKTYRGVTGV KEFDVVLNNI
SPPYLAVLKD GQFLFHSRDE VLK
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