| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1612 |
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| Symbol | |
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| ID | 4460112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1965014 |
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| End bp | 1967722 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702379 |
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| Product | DNA polymerase I |
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| Protein accession | YP_845734 |
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| Protein GI | 116749047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAC AAGCCAGGAC ATTCTATCTC GTTGACGGAA GCTCCTACAT CTACCGGGCC
TACTATGCCG TCTCGCGGCT GACCAACTCG AGGGGGTTCC CGACGGGCGC CGTCCTCGGT
TTCGCGCAGA TGCTCGACAA GGTGGTCCGG GAGAAAAAGC CGGACTACAT CTGCGTGGTC
TTCGACGCCC CGGGTCCCAC TTTTCGTCAC GAGATGTACG CCCCCTACAA GGCAACCCGC
CAGAAAGCTC CGGAGGACAT GATCGCCCAG ATTCCTTACA TCAAGGACCT GGTGAGGTTT
CGCGGCATTC CCCAAATGGA GCTGCCGGGG TACGAGGCCG ACGATCTCAT CGCCACCCTG
ACGCACTGGG CCGTGGAGCA GGACATCGAA GTGGTTGTCG TCTCGAGCGA CAAGGACCTG
CATCAACTCA TCGACGATCC CGTCGTGCGG CAATGGGACC CCCAGAAGGA CCGGGTGTTC
ATGGAGTGGG AGGTGGAAGA CCGCTACGGC GTCCCGCCCG GGCGAATGGT CGACTACCTT
GCGCTGGTCG GGGATTCTTC GGACAATGTC CCGGGCGTCA AGGGCATCGG GGACAAGACG
GCCAGACAGT TGCTGCAGGA ATGGGGTTCG CTGGACCGGA TATACGCGAA CCTGGCCCGG
GTCGGCTCCG CTTCGGTGCG CGACAAGCTC GAAAAGCACC GGGAAGAGGC TCTCCTGTCA
CGGCGGCTGG TGTCCTTTCG GGAAGACGTC CCCGTGGAGA GGAAGCTCGA GGCGTTCGCG
CCGGGGCCGC CTCTCAAATC GCAGCTTATC GGACTCTTCG AGGAACTGGA ATTCAGGTCG
CTGCTCGATT CCCTGCGAAA GGAATTGAAT GCGGTCGAAC CAGCCGCCGC GGCCCCCGCG
GGCCGAACGA AACACAAGAT CGCGGGCTCC ATGGATGAGC TGCGAACACT TGCGGAACGC
CTGGCGGGCG AGCCCGTCGT TTCGATCCAG GTTGAAACCA CGCGCAAGGA TGCGATGGCG
TCGGACCTTG CGGGGCTTTC GTTCGGTTTC GAGGACGACG GGGCCTGGTA CGTTCCCCTG
GGCCCGGACG GTTCGGAAGG CGATGGCCGA CTGCCCGCGG CCGTTGCGCT CGCCGCGCTC
GAACCGGTGC TTGGCCGTTC CCGACCGGCC AAAATCGGGC ACGATCTCAA AACCGCCTGG
ATCGTTTTTA AGAAGCACGG AATCGAGTTG CGGGGGATTG CCTTCGACAC GATGGTGGCC
GCCTACCTGC TCGATCCGGG AAAACAGAAC TACGGCATCG ACCGCGTTGC CGCCGAATGC
CTCGGTGAGA ACATCGATTC CTACGAAGAC GTCACGGGGA AGGGGAAATC GCAGGTCGGC
TTCGACACCA TCGACATCGG GCGGGCCGCC GCCTATTCGT GTGCCGCGGC CGACGCGGCC
CGGCGGATGC ACCCCGTTTT GAAGCGCAAG CTCGATGAAT CCAGGCTGAC GGAGCTGTTC
GAAAAGATCG AATTGCCCCT CATCACGGTC CTGGCCCGCA TGGAATTCAG AGGGATAACG
GCCGACGCGG AGAAACTGGA ATCCCTTTCC ATCGATTTCC AGAAAGCCCT CGATCGGACC
GCCGACACAA TCTACGATCT GGCCAAGGAA AAATTCAACA TTCAGTCTCC CAAGCAACTG
GCGTACATTT TGTTCGAGAA ACTCGGCCTG CGCGTGGTGA AGAAGACCAA GAGCGGCCCA
TCCACGGACA TGGCGGTGCT CGAGGAACTG GCGCTCGAAC ATCCCATCGC GGATCACGTT
CTGGTTTTCC GCACGCTGGC AAAGCTCAAG GGAACCTACG CGGATGCCCT GGGGAAGCTG
ATCAATCCCC GGACCGGGCG CATCCACACG AGTTACAACC AGACCGTCGC GGCCACCGGC
CGGTTGAGCA GCTCGGATCC GAACCTGCAA AACATCCCCA TAAGGACGGA GGAGGGGAGG
AAAATCCGCT CCGCGTTCAT CCCCGCCCCC GGGTGGTTGC TGCTTTCGGC CGACTACTCG
CAGATCGAGC TGCGGATCCT CGCCCACTGC AGCAAGGACG AGCACCTGCT CGAGGCCTTC
CGCGACGATG AGGACATCCA CCGACGCACG GCCGCGGAAA TGTTCGGTGT CTCCCCGATC
GAGGTCACGC CCGAGATGAG ACGCCAGGCC AAGACGATCA ATTTCGGAAT CATCTACGGC
ATGGGACCTT TCGGGCTGGC GCAGCGGTTG CGGATCAGCA CGAAAACGGC CAGGACCGCC
ATCGACAAGT ATTTTCAGGG CTACCGCGGC GTGCGAAGAT TCATCGACAC CACCATCGAG
CTGGCACGGC GTCTGGGTTA CAGCGAAACG CTGCTCGGCC GGCGCCGTTT CATCCCCGAG
TTGCAGAGCC GCAACAAGAC CATTCGACAG CTCGGCGAGC GACTGGCCAT AAACACTCCT
CTCCAGGGCA CGGCCGCCGA CCTCATCAAG AAGGCGATGA TCGACGCCGA AGATGCCTTG
AACGGGAGCG GGCTGCGCAC GGTCATGCTG CTGCAGGTGC ATGACGAGCT GGTCTTCGAG
ACGCCGCGGG AAGAGCTGGC GGCGGCGCAG GAGCTTGTGC GGAGGGTCAT GGAGGATGTC
TGGAAACTCG ATGTGCCGTT GAAGGTCGAA CTGGGATGGG GGGACAACTG GGCCGAAGCC
CACGCCTGA
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| Protein sequence | MTEQARTFYL VDGSSYIYRA YYAVSRLTNS RGFPTGAVLG FAQMLDKVVR EKKPDYICVV
FDAPGPTFRH EMYAPYKATR QKAPEDMIAQ IPYIKDLVRF RGIPQMELPG YEADDLIATL
THWAVEQDIE VVVVSSDKDL HQLIDDPVVR QWDPQKDRVF MEWEVEDRYG VPPGRMVDYL
ALVGDSSDNV PGVKGIGDKT ARQLLQEWGS LDRIYANLAR VGSASVRDKL EKHREEALLS
RRLVSFREDV PVERKLEAFA PGPPLKSQLI GLFEELEFRS LLDSLRKELN AVEPAAAAPA
GRTKHKIAGS MDELRTLAER LAGEPVVSIQ VETTRKDAMA SDLAGLSFGF EDDGAWYVPL
GPDGSEGDGR LPAAVALAAL EPVLGRSRPA KIGHDLKTAW IVFKKHGIEL RGIAFDTMVA
AYLLDPGKQN YGIDRVAAEC LGENIDSYED VTGKGKSQVG FDTIDIGRAA AYSCAAADAA
RRMHPVLKRK LDESRLTELF EKIELPLITV LARMEFRGIT ADAEKLESLS IDFQKALDRT
ADTIYDLAKE KFNIQSPKQL AYILFEKLGL RVVKKTKSGP STDMAVLEEL ALEHPIADHV
LVFRTLAKLK GTYADALGKL INPRTGRIHT SYNQTVAATG RLSSSDPNLQ NIPIRTEEGR
KIRSAFIPAP GWLLLSADYS QIELRILAHC SKDEHLLEAF RDDEDIHRRT AAEMFGVSPI
EVTPEMRRQA KTINFGIIYG MGPFGLAQRL RISTKTARTA IDKYFQGYRG VRRFIDTTIE
LARRLGYSET LLGRRRFIPE LQSRNKTIRQ LGERLAINTP LQGTAADLIK KAMIDAEDAL
NGSGLRTVML LQVHDELVFE TPREELAAAQ ELVRRVMEDV WKLDVPLKVE LGWGDNWAEA
HA
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