| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1596 |
|---|
| Symbol | |
|---|
| ID | 4460096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1944877 |
|---|
| End bp | 1945611 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639702363 |
|---|
| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| Protein accession | YP_845718 |
|---|
| Protein GI | 116749031 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGGA TCAGGTCCAT ATTCTTCCAT GTCTTACTGT TTGTGGACAC GATCGTGCTC
GGCCTGGCGG CCATCGCCTG CTCCAAGCTC GACAGAACGG GCAACTGGTC GCATCTCGTC
GCCAGGTTCT GGGGCAATCT GAATCTGCGG GTAGCCGGAG TGGAGGTCGA CGTGCACGGA
TTGGAGCGCC TCAGACCCGA GCGGCCGTGC ATCTATGCCG CCAATCATCA AAGCCTGTTT
GATATTTTCG TCGTTCTGGG GAAGCTCCCC GTGCAATTTC GATGGTTGGC CAAGGAAGAG
CTGTTTCGCC TTTTCGTCAT GGGAAGGGCG ATGAAAGCCA CCGGGTACAT CCCCATCAAT
CGTTCCGATC ACCGCAAGGC GTTCGAAAGC ATCAACCAGG CTGCGGACAA GGTCAGAGGC
GGGGTTTCCA TCGTGATCTT CCCTGAGGGC ACCCGGAGTG AGAACGGTGT CTTGAAGGAT
TTCAAGAAAG GAGGCTTCAT CCTCGCCATT AAATCCCAGC AGCCGATTGT TCCCATCAGC
ATCAGCGGAT CGCACCGGGT GGTTCCCAGG AAGGACAAGT GGGTCATTCA TCCGGGGGTC
GTCCGGATGA CCATCGGAGA TCCGATCCCG ACGGCCGGCG CGACGACCAA GGAACGCGAC
CTGTTGATCG AGGAGGTCAG AGAAGCCATC CGTCGATACC TGACCACCGA AGAGGGAGGT
ACCGCGACGT TTTAG
|
|---|
| Protein sequence | MKRIRSIFFH VLLFVDTIVL GLAAIACSKL DRTGNWSHLV ARFWGNLNLR VAGVEVDVHG
LERLRPERPC IYAANHQSLF DIFVVLGKLP VQFRWLAKEE LFRLFVMGRA MKATGYIPIN
RSDHRKAFES INQAADKVRG GVSIVIFPEG TRSENGVLKD FKKGGFILAI KSQQPIVPIS
ISGSHRVVPR KDKWVIHPGV VRMTIGDPIP TAGATTKERD LLIEEVREAI RRYLTTEEGG
TATF
|
|---|
| |