Gene Sfum_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1537 
Symbol 
ID4460622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1897380 
End bp1898237 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content63% 
IMG OID639702303 
Producthypothetical protein 
Protein accessionYP_845660 
Protein GI116748973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.756577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC CCCAGTCTGC AAGTTTCCCC ATCGACCTCG TTGCCCGATT TGTTGGAAGG 
CTTTTTCAGA TGATCATGCT GGCCGGCATG GGTCTCATGG TGTTCGGGGC AATGCCGGTG
ATCGAGGTGA TATCGGCGGC CAACTGGCCT TCCACGAGGG GAGTGATCCT CTCATCCGGC
GTCAAGGCCG GGACACCCGG GGGAAAGAGG TTGCGGACGC CCAAGGTCGT CTACCGATAT
GCCGTGAAGG ACGTTCGATA CCAAGGCGAG AGAGTTCGGT TCGGACCCGA CTACATTCCG
GGACGCCCGT CCGCCGCGGC CGTGGCCGCC GGTTATCGGG AGGGGGATGC AGTGGAGGTG
TTCCATGACC CTGCCGATCC AGCGAAATCC GTGCTGGACA GGGCATTCCA TCCAGGGATG
TTCGCCATGC CCCTAGCGGG TTTCTTTCTC TTTTTAGTGG GCGGTGCGGT CAACCGCAAA
ATCACGGAGG TGACGAACGC TGTCCGGCAA AAGATTCCCC TGCCGGTGCC CCGGGGTGAC
GGGACCTTCC CGGACGGGAA GATCCGGGCT TCTTCGCCGC GCGTGGGAAG GGATGAAGAT
CCGGGAGGAA AGGCTTCGGT CGAGGGGTTT CCCGCCGGGG ACTTCCTTGC CGGGGGGGCG
CCCCGCGCGC GGAAGGTGGA AAAAACGATG TTCGGAAGGG ACGCATCCGC CTGGTCGTCT
CCCGGTCCCG CATTTCCGGA CCCGGGGATC GGGTCGGCCC TCTCCTGGAG GACAATACTG
ATACGAGTGC TGTGGCTCGT CCTCGGGGTC CTGATCATCC TGTACCTGAT CCGGGAAAGC
GGGCTGCGCT TCGGATAA
 
Protein sequence
MSEPQSASFP IDLVARFVGR LFQMIMLAGM GLMVFGAMPV IEVISAANWP STRGVILSSG 
VKAGTPGGKR LRTPKVVYRY AVKDVRYQGE RVRFGPDYIP GRPSAAAVAA GYREGDAVEV
FHDPADPAKS VLDRAFHPGM FAMPLAGFFL FLVGGAVNRK ITEVTNAVRQ KIPLPVPRGD
GTFPDGKIRA SSPRVGRDED PGGKASVEGF PAGDFLAGGA PRARKVEKTM FGRDASAWSS
PGPAFPDPGI GSALSWRTIL IRVLWLVLGV LIILYLIRES GLRFG