Gene Sfum_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1533 
Symbol 
ID4460618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1893091 
End bp1894281 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content58% 
IMG OID639702299 
Productcitrate (Si)-synthase 
Protein accessionYP_845656 
Protein GI116748969 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTG ACGTCAGCTT CAAGAATATC GGTCTTCGCG GCATAACCGT GGCCGACACC 
AAAATAAGTT ACATCGACGG AGTGCGCGGA ATTCTGATAT ACCGCGGATT CCGTATCGAG
GATCTGGCGG AGATTTCCTC TTTCGAGGAG ACCGCGTACC TGCTGTTGAA CGGTGGTTTG
CCCGACAAAG AGGGACTGGC CGCTTTCAGG GACGCGCTCA CCGCAGCCGG CCGGCTCCCC
GACGAAATCT CCGAAAGCTT CAAGCTGTGG CCCCGCAGGT CCGATCCCAT GGACATCATT
CAGGCATCGG TTCCCATCCT CGCCATGATC GATCCGGAGC TCGCAGCCGA ATCCAGAGAA
GCCAACCTGC GCAAAGCGAT ACGGGTCATC GCCCGACTGC CTGAAATCAT CACCACCTGG
CACAGAATGC GAAACGGTCT TCAGCCCCTG CCTCATGATC CGAAACTCGG TCACGCCGGG
AACTTCCTCT GGAAGCTCAC CGGGAAGAAA CCCGAGGAGG AAATGGCCCG AGCCTTCGAA
GTCTCTCTGA TTCTACAGGC GGACCATGCC TTCAGTGCGT CCACATTCGC CTGCAGGGAA
GTGGTGTCCA CCCGGGCGCA CCTGTATGCC GGGGTCACCG CAGGGGTGGG AGCTCTTTCA
GGAATCCTCC ACGGGGGCTC CAACGCCTTG GTCATGCGGG TAATGTTCGA CATGATCGAC
CAGGGGATGA CCACGAAGGA CATCGGCGCC TGGGTTAAAG GAAAGCTTGA CCGGCGCGAG
AAGATAATGG GGATGGGCCA CGCGGTTTAC AAGACCACCG ATCCCAGGGC CGAGATCCTC
AAGGGCCTGT GCGAAAACGT GGCCATAAAG ACCGAGCGCG AGGAGTGGTT CAACTTCCTG
AGGGCGATAG AAACCGAATG CATCCGGGAA TTCGAAAAAA GAGGCAAGAG GAAGATCAAG
GCCAACGTCG ATTTTTACAG CGGTCTGCTC TGCGCCATGC TCGGAATACC GCTCGATATC
ATGACTCCCG TATTCGCGAT GGCGATTGCG GTCGGCTGGT GTTCGCACAT CATCGAGGAA
AAATTCGGCG ATGCGCAGGG GAAGCCCGTA TTGTACCGTC CGGAATCCAA GTATGTCGGC
CATTATTGCG GCCAGTTCGG CTGCACCTAT CTGCCCATCG AGCAACGGTA G
 
Protein sequence
METDVSFKNI GLRGITVADT KISYIDGVRG ILIYRGFRIE DLAEISSFEE TAYLLLNGGL 
PDKEGLAAFR DALTAAGRLP DEISESFKLW PRRSDPMDII QASVPILAMI DPELAAESRE
ANLRKAIRVI ARLPEIITTW HRMRNGLQPL PHDPKLGHAG NFLWKLTGKK PEEEMARAFE
VSLILQADHA FSASTFACRE VVSTRAHLYA GVTAGVGALS GILHGGSNAL VMRVMFDMID
QGMTTKDIGA WVKGKLDRRE KIMGMGHAVY KTTDPRAEIL KGLCENVAIK TEREEWFNFL
RAIETECIRE FEKRGKRKIK ANVDFYSGLL CAMLGIPLDI MTPVFAMAIA VGWCSHIIEE
KFGDAQGKPV LYRPESKYVG HYCGQFGCTY LPIEQR