Gene Sfum_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1309 
Symbol 
ID4461110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1614275 
End bp1615708 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content63% 
IMG OID639702078 
Productaldehyde dehydrogenase 
Protein accessionYP_845436 
Protein GI116748749 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.472659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0179284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACAC CGGAAACACC CCGTCGCCTT TTGGTGGCCG GACGATGGGT CACCGACGCC 
GAATCCATGC CGGTCATCGA CAAGTACACG GGTGAAACGA TCGCCGCGGT GCCCGTGGCT
TCCGCAGAGA CTGTGGACAG GGCCGTGGCC GCGGCCTGCG AAGCGTTCCC GGTCTATTCG
AGGACCCCGG CACACGAGCG TTCGCGCATC CTGGAGAAAG CGGCTTCCCT GCTCGAAAGC
AACAGCGAGG AGATCGCCGC CCTGATCTGC CGGGAGGTGG GCAAACCCTG GAAATATTCG
ATCGGCGAGG TTTCCCGGAG CATCGAGACC ATTCGGTTTT CAGCGGAAGA GGCCAAACGG
ATACACGGCG AGACCGTGCC GATGGACGCG AGCGCCACCG GGGAGGGACG CATGGGGTTT
TACCTGCGAA GCCCGGTGGG GGTCGTCGCT GCAATCACGC CCTTCAATTT TCCGCTGAAC
CTGGTGGCCC ATAAGGTGGG GCCTGCTCTG GCCGCGGGGA ATGCCGTCGT CTTGAAGCCC
GCGTCGACCA CTCCGCTGAC GGCCCTCCGC CTGGGTGAAA TCATCCAGGA GGCCGGGCTG
CCGCCCGGCG TCCTGAACAT CGTCGCCGGA CCCGGAGGCA CGGTGGGAGA CCGGCTCGTA
AGCGACCCGC GAGTGGCCAA GGTCTCGTTC ACCGGCAGCC CGCCGGTGGG CGAAGCCATC
ATCCGCAAGG CGGGCCTCAA GAAAGTCACC CTGGAGCTGG GAAACAACTC GGGGACCATC
ATCGAACCCG ACGCGAATCT GGATGAGGCG GTTGCGCGCT GCGTCATGAG CGCTTTTGCC
AACTCCGGCC AGGTCTGCAT CTCGCTGCAA CGGCTCTACC TTCACCGGGA CATCACAGAA
GAATTCACGA AACGTTTCCT GGATGCGACC GCCAGGCTCA AAGTCGGCAA TCCGCTGGAT
CGGGATTGCG ACATCGGTCC CATGATCGGC GAGGCCGAGG CGATCAGGGC CGAATCCTGG
ATCTCCGAAG CGGCAGCCGG AGGCGCCAGG GTTCTGATCG GCGGCAGGCG GGACGGTGCC
GTGCTCTACC CTACCGTGCT CACCGACATC AGGCCCGATA TGAAGGTCTC GTGCGGGGAG
GTTTTCGCGC CGCTCGTTTC ACTCTGTCCG TACGACCGGT TTGAAGATGC CGTGCGAATG
GTTGACGAAT CCGCCTACGG CCTGCAGGCC GGCATCTACA CGAAGGACAT CCGAAAGGCG
CTCTACGCCG TCGACCAGAT CAACGCCGGC GGCATCATGA TCAATGACAC CTCGATTTTC
CGGGTGGATC ACATGCCTTA CGGGGGGAAC AAAAAAAGCG GCCTGGGCCG CGAGGGAGTT
CGGTTCGCCA TCGAAGAGAT GACGAACATC AAGATGGTCG TCATCAAACC CTGA
 
Protein sequence
MHTPETPRRL LVAGRWVTDA ESMPVIDKYT GETIAAVPVA SAETVDRAVA AACEAFPVYS 
RTPAHERSRI LEKAASLLES NSEEIAALIC REVGKPWKYS IGEVSRSIET IRFSAEEAKR
IHGETVPMDA SATGEGRMGF YLRSPVGVVA AITPFNFPLN LVAHKVGPAL AAGNAVVLKP
ASTTPLTALR LGEIIQEAGL PPGVLNIVAG PGGTVGDRLV SDPRVAKVSF TGSPPVGEAI
IRKAGLKKVT LELGNNSGTI IEPDANLDEA VARCVMSAFA NSGQVCISLQ RLYLHRDITE
EFTKRFLDAT ARLKVGNPLD RDCDIGPMIG EAEAIRAESW ISEAAAGGAR VLIGGRRDGA
VLYPTVLTDI RPDMKVSCGE VFAPLVSLCP YDRFEDAVRM VDESAYGLQA GIYTKDIRKA
LYAVDQINAG GIMINDTSIF RVDHMPYGGN KKSGLGREGV RFAIEEMTNI KMVVIKP