Gene Sfum_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1276 
Symbol 
ID4460859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1575910 
End bp1576812 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID639702045 
Producthypothetical protein 
Protein accessionYP_845403 
Protein GI116748716 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.849487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAATC AGCACAACCC GGAGAAAGAC CGTATCGGGC AGGCCTTTGC CCTGGCCAGA 
GCCGAGAAAC CGGCCTACGC CGATCTCTAT CCTTTCCTCG AAACGCTTTT CCTGCTCAGG
GCGGGCGGCA AGAGCGCCGC GCGTCCGGAG CGGTTCGAGT TGAGCGCCGA GCACGCGCGG
GCCCGCTGGG AAGGCTCCTT CCCACTGCTC AGGCGCTGGG AGTTTCCGCT CGACACGGAG
GCGGCGGAAA GCCTCCTCGA AATGATTGCC GGAAGCCTCC CGGAAGACAA CGTGCAGCTC
AAGGGAGCCC ATGAGTCCCT CTCCCGCGCC CTGGCGAACC ATCCCGAGCA GAGAACGGCC
ATCTGGAGAA GTTTCCTCCA GCATGAAATG GAACCCTGGG AGGAATGGCT GGATGTGGCG
GGAGTGGATA CGGCGTCCCT GCTCTTCCTG GCCAGGAACT GCCTCAGGCC TTCGGTGGAA
CTGGTGGCCG AAGATCTGCT GCAACGCTTC CCCATCCCGA AGGAGTGGCT GAAAGGATAC
TGCCCGGTCT GCGGGTCGCT CCCATCGCTT CTCTTCCTCG AAAAAGACGG CCAACGAAAC
GGGTATTGTT CCTGGTGCGG CACGTCCTGG GGACTCAACC GCCTCCAGTG CTGCTATTGC
GACAACCGCT TCCATGAATC GCTCGGCTAT CTGTACGCGG AGGCCGAGAC TCATTACCAC
ATCCAGTACT GCAATCTGTG CAAGTACTAC TTCAAGCTCG TCCTCACGGG TGAGTTGCTG
TACCCGCCGT ATTTGCCGCT GGAGGAATGG ACGACGCTTC ATCTTGATCT TCTGGCCCAG
CGCGCCGGTT TTAAGCAACC TCCCTCCCCC TCCCCAGTGG TCTATGGAGA TGCCCCGGCG
TAG
 
Protein sequence
MDNQHNPEKD RIGQAFALAR AEKPAYADLY PFLETLFLLR AGGKSAARPE RFELSAEHAR 
ARWEGSFPLL RRWEFPLDTE AAESLLEMIA GSLPEDNVQL KGAHESLSRA LANHPEQRTA
IWRSFLQHEM EPWEEWLDVA GVDTASLLFL ARNCLRPSVE LVAEDLLQRF PIPKEWLKGY
CPVCGSLPSL LFLEKDGQRN GYCSWCGTSW GLNRLQCCYC DNRFHESLGY LYAEAETHYH
IQYCNLCKYY FKLVLTGELL YPPYLPLEEW TTLHLDLLAQ RAGFKQPPSP SPVVYGDAPA