| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1225 |
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| Symbol | |
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| ID | 4460995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1513958 |
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| End bp | 1517452 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639701992 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_845352 |
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| Protein GI | 116748665 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.344496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.610841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCT TCGTTCATCT TCACGTTCAC ACTCAATACA GTCTTCTCGA TGGGGCCATA
CGCCTTACGG ATTTGATTGA AACGGCACGG AGCATGGAGA TGCCGGCGGT GACCATGACG
GACCACGGCA ACATGTTCGG GGCACTCGAG TTCTACGAAA AGGCCAAGGC GGCCGGGATC
AGGCCGATCA TCGGTTGCGA GGTCTACCTC GCTCCGAGGA GCCGGCACGA TCGCCACGGC
AGAGCCGAAG GTTCGGGGAC GGGCGAAGAG GACAGAAACT ACCACCTGGT GCTGCTCGCA
AAGGACGCGA CCGGTTATCA GAACCTGATG AAACTGGTGA GCGCCGGCTA CCTTGAGGGC
TTCTACTACA AGCCCAGAAT AGACAAGGAG ATTCTCCTTC AACACCACGA GGGATTGATC
GGGCTTTCCA GCTGCCTCAA GGGAGAGGTG GCGACGCTCC TGTCGCGGAA TCAGGAGAGC
GCCGCGCGGG ATGCCGCCCG CGAGTATGCC GGCATCCTCG GTCCGGATCA CTTCTACCTG
GAATTGCAGG CGAACGGGAT GCCCGAACAG GCGAAGGTCA ACGAACGGCT GATCGTCATG
GGCAAAGAGC TCGGCCTGCC CCTGGTCGCA ACCAACGACT GCCACTATCT GCGCAAGAGC
GATGCCCGCG CCCACGAAAT CCTGCTCTGC ATCCAGACCG GGAAGACCGT GCTCGATGAA
AAACGCATGA AGTTCCAGAC GGATCAGCTC TACTTCAAGT CCCCGGAGGA GATGGCGCGG
GAATTCGCCC ATGTTCCCGA AGCGCTGGAG AATTCGGTGG CCATCGCCGA ACGCTGTCGA
TTGGAGCTGA AGCTCGGGGA CTATCATTTT CCGGTGTTTC CGCTCGATGA AGGGGAGAGC
GTCGAAGACA AGTTTGAAAA AACGGCGCTA GAGGGGTTCC GGCGGCGACT GCGGGAACTC
GAAAAGAGAC GCTCCGGGTT CTCCGAGCAG GACCGCGGGG AGTACGAAGA GCGGCTCCGC
AGCGAGTTGG CCGTCATTCG GGAGATGGGC TTTGCCGCCT ACTTTTTGAT TGTCGGCGAT
TTCATCAACT ACGCCAAGAG CCACGGCATA CCCGTCGGGC CGGGGCGCGG ATCGGCGGCG
GGAAGCCTGG TCGCCTACGC CATGAACATC ACCGACCTGG ACCCCATCGA ACACGGGCTG
ATCTTCGAGC GCTTCCTCAA CCCGGAACGC ATCAGCATGC CGGATATCGA CGTGGATTTC
TGCATCCGCG GACGGGAGGA AGTGTTCAAT TACGTTTCGG AAAAGTACGG CAAGAACCGT
GTCGCCCAGA TCACCACCTT CGGAACCATG CAGGCCCGGG CCGTGATCCG GGACGTGGGC
CGCGCCCTGG CAATGCCTTA CAACGAGGTG GATCGCATCG CCAAGCTGAT CCCGTCGTCG
CTGGGAATGA CATTGGAAAA GGCCTTCCAG GCGGAGCCCC GCCTGGCCGA ACAACAGCGG
GAAGATCCGC AGATCAGGGA GCTTTTTGAA ATCGCCTTCG CCCTTGAAGG ACTCACCCGG
CACGCCTCCA CTCACGCCGC CGGGGTGGTC ATGGCGGACA GGCCCATCGT GGAGTACATG
CCTCTCTACC TCGGTCAGGA CGGCGAGGTC GTGACCCAGT ACCCCATGAA GTACGTGGAA
AGGGCCGGCC TGATCAAGTT CGACTTCCTC GGGCTGAGGA ACCTCACCGT CATCGATGAC
GCGGTTCGTC TCATCCGGGA AACCCACGGC CTGGAATTGG ACATGCTCGC GCTGCCGCTC
GATGACCGGG ATACGTACGC CTTGCTCAGC CGGGCCGACA CCACGGGCGT TTTCCAGCTG
GAAAGCTCGG GAATGAGGAA CATCCTGGCT CGCCTGAAAC CCGAGAACTT CGCGGATATC
GTCGCTCTGG TCGCCCTCTA CCGCCCGGGC CCGCTCGAAA GCGGGATGGT GGAGCTTTAC
ATCCAGGGAA AGCACGGCCA GATCGAGATC ACGTACGATC CGGAGATTCT GCGGCCCATC
CTTGAGCCGA CCTACGGGGT TATTCTCTAC CAGGAACAGG TCATGAAGAT CGCCAGCGTG
ATGGCGAGCT ACACTCTGGG CGAGGCGGAC GTGCTGCGCC GCGCCATGGG CAAGAAGAAT
GCCGAGGCCA TGCGCGACCA GCGCGCCCGG TTCGTGGAGG GGTCCAGGAA GAACGGAATC
CCCCTCGCCA AGGCCAACCA TATTTTCGAC CTCATGGAGA AATTCGCCGG CTACGGGTTC
AACAAGTCCC ACAGCGCGGC ATACGCGCTG GTGGCCTACC AGACCGCCTA TCTGAAGACG
CATTACCTCG TCGAGTTCAT GGCCGCCCTG CTCAACAGCT TTCTGAGCAG CTCGGACCAG
GTCGTGAGGC TCATCAGTGA ATGCCGGGAG AAGGGCATCG ACATTCTGCC GCCGGACGTG
AATGCGAGCA GCAGGGACTT CACGGTGGTC GGCGGAAAGA TTCGCTTCGG GTTGGGGGCG
GTCAAGAACG TCGGAGAGGC GGCCATCGAG GTGATATTGA ACACGCGGGT CGAACGCGGC
CCGTTCAAGT CGATCCACGA CTTCTGCCTG CGCGTGGACA CGCAGCGAGT GAACCGCAGG
GTGCTCGAAC AGTTGGTGAA ATGCGGCGCC TTCGATTCGA TTCATTCCTG CAGGGCCGGA
GTCATGGCGG CGCTCGACGA CGCTCTGGAC AAGGCCCAGG CGGTCCAGAG GGATCGACAG
TCGGGCCAGA TCAACATGTT CGACCTGCTC AAGCCCCGGA CAAAGGCGGG AGCGTCCGCT
CTGCCGGAGG TGCCCGAATG GGACGGGCGG CAGACGCTTC AGTTCGAGAA AGAGGCCCTC
GGGTTCTATA TTTCAGGCCA TCCCCTGGAT TCCTACGCGG CGCAGATCTC GCAGCTGTGC
ACCGCGGACA CCCAGGCCGT GAAGGAAAGG AAGGAGGGGG CCGAAGTCAT TCTGTGCGGA
ATGATCAGCA TCGTGAAGGA ACTCACCACC AAGAAGGGGG ATCGCATGGC CTTTCTTGCC
ATCGAGGACA AGGAGGGCGT GCTCGAAGTG GTGGCCTTCT CGGAGACGTT CATGCAGTCG
CGGGACCTGT TGCAGACCGA TGAACCGCTG GTGGTCGTCG GCAAGGTTCA GCACGATGAA
AAAGGGAGCA AGATCATTGC GAATCATGTT CTTTCTCTGG AGGACGCCCA GGTTCAGACC
GTTGAAGAGG TCCGCATCCG CCTGATGGCG GATGCCCTGG ACCGGGACGG GCTGACGCGG
CTCCGTCACC TGTTGATCAG CCATCCGGGC GGATGCAGGA TCCTCCTGCA TCTGCAGGTT
GCAGACACGG GAGAGGCGGT GATCGCCGTC AGCGACAAGC TGACGGTGAG CCCTACCAAA
AACTTTTTCC AGGACATGAG CCTTCATTTC GGACCGAATT CCGCGGAGCC GGTGTACAAG
ATCTGCGCCG CGTGA
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| Protein sequence | MNAFVHLHVH TQYSLLDGAI RLTDLIETAR SMEMPAVTMT DHGNMFGALE FYEKAKAAGI
RPIIGCEVYL APRSRHDRHG RAEGSGTGEE DRNYHLVLLA KDATGYQNLM KLVSAGYLEG
FYYKPRIDKE ILLQHHEGLI GLSSCLKGEV ATLLSRNQES AARDAAREYA GILGPDHFYL
ELQANGMPEQ AKVNERLIVM GKELGLPLVA TNDCHYLRKS DARAHEILLC IQTGKTVLDE
KRMKFQTDQL YFKSPEEMAR EFAHVPEALE NSVAIAERCR LELKLGDYHF PVFPLDEGES
VEDKFEKTAL EGFRRRLREL EKRRSGFSEQ DRGEYEERLR SELAVIREMG FAAYFLIVGD
FINYAKSHGI PVGPGRGSAA GSLVAYAMNI TDLDPIEHGL IFERFLNPER ISMPDIDVDF
CIRGREEVFN YVSEKYGKNR VAQITTFGTM QARAVIRDVG RALAMPYNEV DRIAKLIPSS
LGMTLEKAFQ AEPRLAEQQR EDPQIRELFE IAFALEGLTR HASTHAAGVV MADRPIVEYM
PLYLGQDGEV VTQYPMKYVE RAGLIKFDFL GLRNLTVIDD AVRLIRETHG LELDMLALPL
DDRDTYALLS RADTTGVFQL ESSGMRNILA RLKPENFADI VALVALYRPG PLESGMVELY
IQGKHGQIEI TYDPEILRPI LEPTYGVILY QEQVMKIASV MASYTLGEAD VLRRAMGKKN
AEAMRDQRAR FVEGSRKNGI PLAKANHIFD LMEKFAGYGF NKSHSAAYAL VAYQTAYLKT
HYLVEFMAAL LNSFLSSSDQ VVRLISECRE KGIDILPPDV NASSRDFTVV GGKIRFGLGA
VKNVGEAAIE VILNTRVERG PFKSIHDFCL RVDTQRVNRR VLEQLVKCGA FDSIHSCRAG
VMAALDDALD KAQAVQRDRQ SGQINMFDLL KPRTKAGASA LPEVPEWDGR QTLQFEKEAL
GFYISGHPLD SYAAQISQLC TADTQAVKER KEGAEVILCG MISIVKELTT KKGDRMAFLA
IEDKEGVLEV VAFSETFMQS RDLLQTDEPL VVVGKVQHDE KGSKIIANHV LSLEDAQVQT
VEEVRIRLMA DALDRDGLTR LRHLLISHPG GCRILLHLQV ADTGEAVIAV SDKLTVSPTK
NFFQDMSLHF GPNSAEPVYK ICAA
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