| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1214 |
|---|
| Symbol | |
|---|
| ID | 4460639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1501546 |
|---|
| End bp | 1501995 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639701981 |
|---|
| Product | GatB/Yqey domain-containing protein |
|---|
| Protein accession | YP_845341 |
|---|
| Protein GI | 116748654 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1610] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.344174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAC TCCTGCAGGA TATCGAGCAG GCATTGAAAG ACGGCATAAG GGAAAAGGAC
GAGAACAAGC GGAATGCTGT CCGGCTTCTG TTGACCGCCG TCAAGGTGAA GGAAAAGGAA
CTCCGGCGTC TTCCCAACGA CATGGAAATA CAGCAGCTGA TTTCCACGCA GATCAAACAG
CGCCGGGAGT CCGCGGAGCA GTATTCGAAG GCGAACCGGC CGGACCTGGC GGGGGTGGAG
GAAGCGGAAA TTGCGGTGCT TCAAGCCTTT CTCCCCGAGG CGCTGTCTCC GGAGTCCCTG
GAACGGCTCA TCGACGAAGT GGTCGCTGAA GTCGGTGCTC AATCCGCCAG GGATATGGGG
AAGGTGATGA AGGCGCTCAT GCCTCGTGTC GGGGGGCGCG CCGAGGGGAA AGCCGTCAAC
GAACTGGTGC GCCGCAAGCT TTCCGCGTGA
|
|---|
| Protein sequence | MMALLQDIEQ ALKDGIREKD ENKRNAVRLL LTAVKVKEKE LRRLPNDMEI QQLISTQIKQ
RRESAEQYSK ANRPDLAGVE EAEIAVLQAF LPEALSPESL ERLIDEVVAE VGAQSARDMG
KVMKALMPRV GGRAEGKAVN ELVRRKLSA
|
|---|
| |