Gene Sfum_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1090 
Symbol 
ID4460529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1347547 
End bp1348353 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID639701854 
Producthypothetical protein 
Protein accessionYP_845218 
Protein GI116748531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCC ACGAGCGGAT CAGCCTGCCG CAGGTGGCTC AGTACGTGGC CAGCATGTAC 
AAGGAGGATT TCGTCTACTC GCATTATGAG CAGAAAATCC GGGAGATCAT GCTTCGCCGC
TACGGCGCGC GCATCGACTC CGAGCATCGC AAGCTCCCCC TCGACCGTTT TCTCACCGAG
GTCGGAAAGA TGATATTGGG GCGCAGGGAT GACGAGCCGC ACAAGATCCT GGCCGACCTC
CCCTTTCGCC TGTACGTCAC GGCAAGCCTC AATTCCTTCC TGAGCGACGC GCTGCGCCGT
TCGGGAAAGG CGCCGCAGGA AGTCGTGCTC GGTCTTGGAG AGCCCGCCGG AGTTCGGCTC
CGGTCCGAAC CGTCCCCGGA GCAGCCTCTC GTCTACCACC TGTTCGGTCA CTTCGGCAGG
CTTCGCGAAA CCGTGCTCAC GGAAGACAAC TACTTCGATT TCCTCATCCA CTTCTGGAAG
GACAAGGAGT CCATCCCGCG GATGGTGCGC GCGGCGCTGA TCAACACGAG CCTCATTTTT
CTCGGTTTCA GGATGCACCA CTGGGATTTC CGGGTGCTCT TTCGCAGCCT CCTGTCGCAG
GAGGGAGCCA AGCGCCGCTC CAGGCACATG CACGTGGCCG TGCAGATCGA CCCGGATGAC
GACCAGGTGG TCGATCCGGA GCGCGCGCGG GATTACCTGG AAAACTACTT CTCGGATTTT
GCGGAAGCCG ACATCAACGT CTACTGGGGT TCCGCGGAGG ACTTCCTGCA GGAGCTCAAA
AGACGCTGGG ATGGATTCGG GGGGTGA
 
Protein sequence
MAFHERISLP QVAQYVASMY KEDFVYSHYE QKIREIMLRR YGARIDSEHR KLPLDRFLTE 
VGKMILGRRD DEPHKILADL PFRLYVTASL NSFLSDALRR SGKAPQEVVL GLGEPAGVRL
RSEPSPEQPL VYHLFGHFGR LRETVLTEDN YFDFLIHFWK DKESIPRMVR AALINTSLIF
LGFRMHHWDF RVLFRSLLSQ EGAKRRSRHM HVAVQIDPDD DQVVDPERAR DYLENYFSDF
AEADINVYWG SAEDFLQELK RRWDGFGG