Gene Sfum_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1018 
Symbol 
ID4460954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1254010 
End bp1254366 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content59% 
IMG OID639701781 
Productnitrogen regulatory protein P-II 
Protein accessionYP_845147 
Protein GI116748460 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.466581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.730099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATGA TCAAATCCAT CGTCAGACCG GAGAAGGTGG ACAACGTTCT TGCCGCGCTC 
ATGGAAGCCG GCTTCCCGGC GGTGACCAAG ATGTCGGTGG TCGGCCGCGG CAAGCAGCGC
GGAATAAGAA TAGGGGAGAT CACCTACGAC GAGATTCCGA AGGAACTGCT CCTCACCGTC
GTGCAGGACC ACGACAAGGA CTTCGTGATC AAGACGGTCA TCGCCGCCGC CCGGACCGGG
GACAAGGGCG CCTACGGGGA CGGCAAAATC TTCGTCAGTC CGGTGCACGA GGTCTACACG
ATCAGCTCCG GAATCCGGGA AAAGTCCTCG GGGGTCCTCG AAGAGGTGAA CCTATGA
 
Protein sequence
MIMIKSIVRP EKVDNVLAAL MEAGFPAVTK MSVVGRGKQR GIRIGEITYD EIPKELLLTV 
VQDHDKDFVI KTVIAAARTG DKGAYGDGKI FVSPVHEVYT ISSGIREKSS GVLEEVNL