Gene Sfum_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0994 
Symbol 
ID4460913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1219224 
End bp1219817 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID639701758 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_845124 
Protein GI116748437 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.199668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC ACCTGGAAGG AAGACTGCGC CACAAAGCTC CCGACTACAT CGTGATCGAC 
GTGCACGGGG TGGGCTACAT CGTGTATGTC CCGCTGAGCA CGTTCTATGA CCTGCCCGGG
CCGGGCGATA CGGTCGCTCT GAACATTCAC ACCCATATCC GCGAAGACGC CATTCAACTC
TACGGGTTCA GGACCGTCGC CGAAAAGGAC ATGTTCTTGC GGCTGATCAC CGTGAATGGG
GTCGGGCCGC GACTGGCGGT GAACATCCTG TCGGGATTGA CGCCGGATGA CCTGCACAGG
ATCATCCTTC AGCAGGAAGG TTTCCGTCTC AAGAGCATTC CGGGAGTGGG GAAGAAGATC
GCCGAGCGGA TCCTGCTCGA ACTGCGGGAC AAGATGTCCG TCAAGAAAGG CAGGGAAGCC
GAGCAGCCGG CTCCTGCCGC GGAATCATCC TATGGCGACG CGTACTCGGC CCTGGTCAAT
CTCGGGTATC GTCCGGCCGA AGCCGAGAAA GCATTGGGAA AGGCGATCAA GTCCCTGGGG
GCGGATCCCC CGGTGGAAAA ACTGCTCAAA GAAACTTTGA GATTGCTGGC ATAG
 
Protein sequence
MIGHLEGRLR HKAPDYIVID VHGVGYIVYV PLSTFYDLPG PGDTVALNIH THIREDAIQL 
YGFRTVAEKD MFLRLITVNG VGPRLAVNIL SGLTPDDLHR IILQQEGFRL KSIPGVGKKI
AERILLELRD KMSVKKGREA EQPAPAAESS YGDAYSALVN LGYRPAEAEK ALGKAIKSLG
ADPPVEKLLK ETLRLLA