Gene Sfum_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0928 
Symbol 
ID4460343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1140204 
End bp1141385 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content62% 
IMG OID639701691 
ProductDNA-directed DNA polymerase 
Protein accessionYP_845059 
Protein GI116748372 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC ATATCGTTCA TTTGGACATC CCCAATTTTT ACGCCGTCCT GGAAGAGCTC 
AGGCGCCCGG AACTGAAAAA GCGTTCCATG GTTCTCGCCG AACCGTCGGC CCGGGCGATC
GTCCAGGGGA TCAACAGCAA CGCCGGCAAG GAAGGCATCC GCGAAGGAAT GCCTTTGGCT
CATGCCCGGC GCATGTGCCG GCGGGTCCTG GCTGTTGCTC CGGATCTTCG TTTTTATCGC
GAGGAACACC AACAGATCCT GAAGGAGTTC GGTTTTTTTT CTCCCCTGGT GGAGGGTGCC
TGGCCGGGGC ATTACTTCGT CGACCTCACC GGCACTCAAC GTCTTCTGGG ACCGGGACCC
GACGTCGCGT GCCGCATGGA GAGGCACCTG GCGACGCAAC GACGGTTGCG GGCGCGCATC
GGCCTCGCCG CTAATAAGCT GGTCAGCCAG GTGGCTTCGA CGTGTATCGT CCCGGGAGAC
CTCAACTGCA TCTTCCCGGG CGGAGAAACT TCCTTTCTCG CCCCCCTGCC GGTGACCTCG
CTTCCCGGCG TGGGCGCCGT AACCGCTTCC CGCTTGGCTG ATTTCAATAT CCGGCGTATC
GGGCAGCTTG CGGCGTTGTC CCTGGAAGCC CTGTGCGGCG TTTTCGGCAA AATGGGCTCC
CGGCTTTTCA ATGTCGCCCG CGGCATCGAC CCGACTCCCG TTCTCCCTTC ACGCGAATCC
CCGCGCCTGG TCGTCGCCCA CAGCCTGGAA CGGGACGAGA TCGACCGGGA CCGCCTGGAA
GCCCTCTTGT TTCAGCAGGT GGAGGAAGCG GGATGGGCAC TGCGATCCCA CAATCGCCAC
CCGACGCGTT TCGTCCTGGA AATCCGGTAC GCGGACGGCA TCACCGCCAG GAGCGCCCAC
GCATTGTTTT CCCCTGCAAT TCATGCGGAT CGAAGGCTGT TCAGGGTGAT TCTCCCCGTT
TTCCGTCAAC TGTTCAATCG CCGGATCGCT CTTCGCCGAA TCGTCCTGGA GCTTTCCGAT
TTTGCCATGC CTTTTCGCCA GGCGTCCCTG TTCTCCCGGG AAGATTCGCC GCCGTCCGGA
GAACGGGATT TGCAGCAGGC CCTGGACGGC ATTCGCGGGC GCTTCGGCAA CCGGGCCATT
TCCTGGGGAA ACGCCATGTC GGGCGCGCAA AGGCAGGCTT GA
 
Protein sequence
MTRHIVHLDI PNFYAVLEEL RRPELKKRSM VLAEPSARAI VQGINSNAGK EGIREGMPLA 
HARRMCRRVL AVAPDLRFYR EEHQQILKEF GFFSPLVEGA WPGHYFVDLT GTQRLLGPGP
DVACRMERHL ATQRRLRARI GLAANKLVSQ VASTCIVPGD LNCIFPGGET SFLAPLPVTS
LPGVGAVTAS RLADFNIRRI GQLAALSLEA LCGVFGKMGS RLFNVARGID PTPVLPSRES
PRLVVAHSLE RDEIDRDRLE ALLFQQVEEA GWALRSHNRH PTRFVLEIRY ADGITARSAH
ALFSPAIHAD RRLFRVILPV FRQLFNRRIA LRRIVLELSD FAMPFRQASL FSREDSPPSG
ERDLQQALDG IRGRFGNRAI SWGNAMSGAQ RQA