Gene Sfum_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0915 
Symbol 
ID4460312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1128068 
End bp1128757 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID639701678 
Producthypothetical protein 
Protein accessionYP_845046 
Protein GI116748359 
COG category[R] General function prediction only 
COG ID[COG4195] Phage-related replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.462654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCC GATCCGATCG TTTCCACAGC TACGCGGAAC TCAAGGCGGC CGAGCGCGAA 
GGAACGGACT ACCGTATCAC CGTGCGGCCC GGGAAACTGC CCATCGCGGT CATGGCTCCG
CACGGCGGGG GGATCGAGCC CGGCACATCG GAGCTCGCAC GGGCCGTTGC CGATGGGAAG
TTCACCTGCT ACTGCTTCGA CGGCGTCAAG CCCCGAGGCA ACGGGAGCCT GCACCTGACC
AGTACCCGTT TTGACGAGCC GTTGGGTGTG GGCGTGGCGT CCGGGGCACA TACCGTCGTC
ACCCTGCATG GCTGCGGAGG CGGGGGAGAA TATGTTCTCG TCGGTGGAGG CAATGCTTTG
CTGGGCGACC GGATCAGGAC GGTTTTGCCG GGGACCGGTA TTGCGGTGCG TCAAGGCTCC
CGGCTTGCCG GCAGGAGCCC GTTGAATCTG TGCAACCGGT GCGGGAACTG CGGGGGAGTG
CAACTGGAGC TCTCGCGCGG CCTTCGCGCC GGGATGTTTA AGGACCTCAC GCCTGAAGGT
CGAAAGATCA CCACCGCCGT GTTCGAAACG TTCGTATCCC GTCTCCGGGA CCTGCTGACG
GATTACGAGA GGGAGATCGA AAAAAAGACG GCCCGGCTCG CACCCGGCAA GGAATCGTTG
AGAGATTTCA CGGCGCCCTC GGCCGACTGA
 
Protein sequence
MPIRSDRFHS YAELKAAERE GTDYRITVRP GKLPIAVMAP HGGGIEPGTS ELARAVADGK 
FTCYCFDGVK PRGNGSLHLT STRFDEPLGV GVASGAHTVV TLHGCGGGGE YVLVGGGNAL
LGDRIRTVLP GTGIAVRQGS RLAGRSPLNL CNRCGNCGGV QLELSRGLRA GMFKDLTPEG
RKITTAVFET FVSRLRDLLT DYEREIEKKT ARLAPGKESL RDFTAPSAD