Gene Sfum_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0885 
Symbol 
ID4460317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1090643 
End bp1091929 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content65% 
IMG OID639701649 
Producthypothetical protein 
Protein accessionYP_845017 
Protein GI116748330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.93655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGA TTTCATGTCG GACGTTTGTG GTGGTGTGTC TGTTGCTTGC CTTGGGACAA 
CCCGCGCACG GCGGGCCTGT CAATCCGACG CCCAGTGACG CATACGGGAA CACGGCGGGC
GGTACGAACG CGCTTTTGAA TACGGATGTC CCCGGCCAGA TGAACACCGC CTTCGGGTAC
TACGCGCTGT TCAGCAGCAG CACCGGTGCG GGCAACACGG CCGCAGGGGC CAATGCGCTC
TTTCTCAACG ACACGGGTAA CGCCAACACC GCAACCGGCG TCAGCGCGCT CAACAGCAAC
AAGGACGGCA GCAACAACAC GGCCGCCGGG GCCTACGCGC TCTGCAACAA CAGCTCGGGA
TCTCAAAACA CCGCTGACGG CTTCTCCGCG CTCAGCAGCA ACACCGGCGG GAACTTCAAC
ACCGCCAGCG GTTACGTGGC GCTTGGCAGC AACAAGACCG GAAGCAACAA CACCGCCGCC
GGGGCCAACG CCCTCCTCTT CAACACCTCC GGTAGTGAAA ACACGGCGTC CGGAGTCGGC
GCGCTTTTCA ACAACGCCAC CGGCGCAAGA AACACGGCCT TGGGGCGCAA CGCGCTCAAA
AACAACGCCA CGGGCAACAC CAACCTCGCC CTCGGCTATG GGGCCGGTTC CCTGCTGACC
AGCGGCGGCG AAAACATCTA TCTGGGCCAT CCGGGAGCGG CGAGCGAATC CAAAACTCTG
CGCCTGGGGA AGGGGCAGAC GCGGGCCTTT GTGGCGGGAG TGGCGGCCGC CGCGGTCGCC
GGGAATGCCG TGTACGTCAC CAAGAACGGC CAATTAGGGA TCAAGGCCTC TTCCGCCCGC
TACAAAACGG ACATTGCACC CCTGGGGGAA CGCAGCGATT CGCTGCATCA GCTGCGTCCC
GTGACATTCC ACTACAAGGA GGAGGCCCGG GGCCTTCCGG AATACGGCCT CATTGCCGAA
GAGGTGGCTG TGGTGTACCC GGAGCTGGTG ACCCGGGACC CGCGCGGCGG CGTCGTGGGA
GTTCGATACG AGGCATTGAT TCCCCTCTTG CTCAACGAGC TACAGCAACA GCAGCGTCTG
CTGAAGGCGC AAGCGCTGCA GATCAGTGCT CAAGCTGAGC GCATCGATGC GGTTCTCGGG
CAACTCGCGG AGCTGAGCGC TCAGAACGAG AGGTTGCGGG CGGCGGTGGG GGAGCTTTGG
GAGCGGGAGG CGGAGCAGAG GGCAACGCGC GTCGCGGCGA CCGCATCGGC TCGTCCGCTC
GCCCACGCCG TGCCGGAATC CCCCTAG
 
Protein sequence
MNRISCRTFV VVCLLLALGQ PAHGGPVNPT PSDAYGNTAG GTNALLNTDV PGQMNTAFGY 
YALFSSSTGA GNTAAGANAL FLNDTGNANT ATGVSALNSN KDGSNNTAAG AYALCNNSSG
SQNTADGFSA LSSNTGGNFN TASGYVALGS NKTGSNNTAA GANALLFNTS GSENTASGVG
ALFNNATGAR NTALGRNALK NNATGNTNLA LGYGAGSLLT SGGENIYLGH PGAASESKTL
RLGKGQTRAF VAGVAAAAVA GNAVYVTKNG QLGIKASSAR YKTDIAPLGE RSDSLHQLRP
VTFHYKEEAR GLPEYGLIAE EVAVVYPELV TRDPRGGVVG VRYEALIPLL LNELQQQQRL
LKAQALQISA QAERIDAVLG QLAELSAQNE RLRAAVGELW EREAEQRATR VAATASARPL
AHAVPESP