Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0793 |
Symbol | |
ID | 4460446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 978991 |
End bp | 979641 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701555 |
Product | sugar transferase |
Protein accession | YP_844926 |
Protein GI | 116748239 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.407437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAAT CCGCAAATCG GACAATCAGC GAGGGGATGC AACGTTACTT GAGCATATCC GCTTTCGACA GGTTCTTGAA ACGAACGTTC GATGTCGTGG TATCGGCTGT CGGACTTACC GCGCTCAGCT GGGTCATCCT GTTGAGCTAC GTGATCGCGT CAATCGATAC GGGAATGAAT GGATTCTTCG TTCAGACCCG CATCGGGAAA CACGGCAGGC CGTTCCCGTT GATCAAGATC CGGACCATGC GCCCGATCTG CGGACACGAC ACGGTGGTGA CGACGACCCA CGATCCGAGA ATAACCAGAA TAGGCGGCTT GTTGCGCAAG ATGAAAGTCG ATGAGCTGCC CCAACTGTTC AACGTACTGG TCGGCCATAT GAGCTTCGTC GGTCCCCGGC CGGACGTGCC CGGTTTCGCC GATTGCCTCG AGGGGGATGA CCGGATCATT CTGTCCGTGC GACCTGGAAT CACGGGGCCG GCCACGCTGC GTTTCCGAGA CGAGGAAAGG GAGCTCGCCG GACAGGCCGA TCCGGAAGAG TACAACCGGG AAGTGATCTA CCCCGAAAAA GTGAGATTGA ACAAGCTGTA CGTGCGCAAT TACAGTTTTA CGCAAGACAT CCGATACATC CTGGCCACGC TTTTCGGCTG A
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Protein sequence | MRQSANRTIS EGMQRYLSIS AFDRFLKRTF DVVVSAVGLT ALSWVILLSY VIASIDTGMN GFFVQTRIGK HGRPFPLIKI RTMRPICGHD TVVTTTHDPR ITRIGGLLRK MKVDELPQLF NVLVGHMSFV GPRPDVPGFA DCLEGDDRII LSVRPGITGP ATLRFRDEER ELAGQADPEE YNREVIYPEK VRLNKLYVRN YSFTQDIRYI LATLFG
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