Gene Sfum_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0770 
Symbol 
ID4461706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp945455 
End bp946420 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID639701532 
Productalcohol dehydrogenase 
Protein accessionYP_844903 
Protein GI116748216 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00613196 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC TGGTGCTCGA ATCGCCCGGC GTTCTGAAAC TCACCGATAT GCAGGTTCCC 
GAACCGGAGC CGCACGAACG GCTGCTTCGG GTCACGCATT GCGCCGTGTG CCGCACCGAT
GCGAAAATGT GGAGCCAGGG ACACCGCGAC CTCAGGCTGC CCCGAATCCT CGGGCACGAG
GTCTGCGTCG TTCCTTCCGA TTCGTCGGGC CGCTTCGTGG TCTGGCCCGG AACGGCCTGC
GGAACCTGCG AATACTGCCG CAAGGGGTTC GAGAACCTGT GCTCGGCCAT GGAGATTCTC
GGGTTCCACC GCCACGGAGG ATTCGCCGAA TACCTTGCGG CGCCTGCGGA CAGCCTGGTT
CCCGTCCCAC CGGAGCTGCC GGGGGCAATC GCCTGCCTTG CGGAGCCCCT GGCCTGCACG
TTGAACGCGC TCGACCGGGT GGGAGCCGCG CCGGGGGAGA GGCTCCTCAT CTACGGGGCC
GGGCCGGTCG GCCTGCTGAT GGCGCTGGCC GCGCGCTCGA GGGGCGCCCT TCCCTTCCTG
CATGAAATCA ACGCCGAAAA GCTTGCCCGC AGCCATGATT TCAGAGGGCA GATCGGAGCG
GAGCTCCATC GCGAGGACCG TCCCGGCGAC TACGACGTCG CGGTGAACGC CGCCCCGGCG
TGGGAGACCC TCGGCGCGGG CCTCCGGAAT CTTGCGGCGG GCGGCCGTTT TTGCGTTTTC
AGCGGGTTTC CCGCGGGAGA TCCTGTACCG GCCGGGCTCA TCAACGAAAT CCATTACCGG
CAACTGGTCG TTTCCGGCGC TTACGGCTGC ACGCGGGACC AGATGCGGGA GGCGGTGGGC
ATCCTTTGCG CCTTTCGGGA AGCGGCACAG CGGCTGATTG AGGACACGAT CGGGCTGCCG
CGGGTGGCGG ACGCCTTTTC TTCCATATTG TCCGGCATGG TTTTGAAGTT CGTGGTCGCA
CTGTAG
 
Protein sequence
MKSLVLESPG VLKLTDMQVP EPEPHERLLR VTHCAVCRTD AKMWSQGHRD LRLPRILGHE 
VCVVPSDSSG RFVVWPGTAC GTCEYCRKGF ENLCSAMEIL GFHRHGGFAE YLAAPADSLV
PVPPELPGAI ACLAEPLACT LNALDRVGAA PGERLLIYGA GPVGLLMALA ARSRGALPFL
HEINAEKLAR SHDFRGQIGA ELHREDRPGD YDVAVNAAPA WETLGAGLRN LAAGGRFCVF
SGFPAGDPVP AGLINEIHYR QLVVSGAYGC TRDQMREAVG ILCAFREAAQ RLIEDTIGLP
RVADAFSSIL SGMVLKFVVA L