| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0745 |
|---|
| Symbol | |
|---|
| ID | 4460828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 913400 |
|---|
| End bp | 915352 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639701507 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | YP_844878 |
|---|
| Protein GI | 116748191 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.701189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA ACATTTTTCC CGTTCCCGAG TCGTGGGCCA AGTCGGCATT CTGCGACAAT
GAGACGTATT TGAAGATGTA TGAGCAGTCG GTCAAGGATC CAGAGGGATT CTGGGGGGAA
CACGCGAAGC GCATCGACTG GTTTCAGCCG TGGACGAAGG TAAAGAGCGG TTCCTTCGAA
GGAGACGTCC GGTTCAAGTG GTTCGAGAAC GGCAAGCTCA ACGTAGCCTA CAACTGCCTT
GACCGGAACC TCGCCAAGCG GGGCGATCAG GTGGCCATCA TCTGGGAAGG TGACGACCCG
AAGGTGAGCA AGTACATCAC CTATCGCGAG CTCCACGACC AGGTCTGCCG TTTTGCGAAT
GTGCTGAAGG CACAGGGCTT GAAAAAAGGC GACCGGGCGA CCATCTATCT TCCCATGATC
CCCGAGCTTG CGGTGGCGAT GCTGGCCTGC GCCCGCATAG GCGTAGTCCA TTCCATCGTA
TTTGCCGGTT TCTCTCCGGA ATCTCTGGCC GGGCGTATCC TGGACTGCGG CGGCAAAGTG
GTGATCACGG CCGATGAAGG ACTGCGCGGC GGCAAGCCGA TTCCATTGAA GGAAAACACC
GAGGAAGCCC TCAAGAAGTG TCCGGATGTC CAGAAAGTCA TCGTCGTCAA ACACACCGGC
GGGAAGGTTC CGGTGGTGCC TGGGCGAGAC GTCGACTGGA CCGAGGCGAT CAAGGCTGCG
TCCCCCGACT GTCCGCCGGA AGTCATGGAC GCCGAGGACC CCCTCTTCAT TCTCTACACT
TCCGGTTCCA CCGGCAAGCC CAAGGGTGTT CTGCACACCA CGGGCGGCTA CCTGGTATAT
ACGGCTCTGT CGCACCAATA TGTCTTCGAC TATCACGACG GGGACATCTA CTGGTGTACG
GCCGATATCG GCTGGGTCAC GGGCCACAGC TACATCATTT ACGGGCCGCT GGCCAACGGC
GCCACGACGG TCATGTTCGA AGGCATCCCG AACTATCCGG ACTGGTCCCG GTTCTGGAAC
GTGGTCGACA AGCACAAGAT CAACATCTTC TACACCGCTC CAACGGCGAT TCGAGCGCTG
ATGCGCCAAG GCGAAGCCCC CGTGAGGGCG ACGTCCCGCA AGTCGCTGAA ACTGCTCGGG
ACCGTCGGGG AGCCGATCAA CCCCGAAGCC TGGCTCTGGT ATTACAACAA CGTGGGCGAG
CAGCGGTGCC CCATCGTCGA TACATGGTGG CAGACGGAAA CGGGCGGCAT CCTCATCACT
CCCCTGCCCG GCGCCACCGC GCTCAAACCT GGCTCGGCCA CCAGGCCCTT TTTCGGAGTC
CAGCCCGCCA TCATCGATCC CGAAGGCAAG ATGCTCGATG GTCCGGGGTC GGGCTATCTG
ATCATCAAGG AATCGTGGCC GGGAATGCTC AGGACCGTGT ACGGCGATCA CGAACGCTTC
AAACAGACCT ACTTCTCCAA TTACCCCGGA CTCTACTTCA CCGGGGACGG GGCACGTCGC
GACGAGGACG GCTACTACTG GATCACGGGA CGCGTGGACG ACGTCATCAA CGTGTCGGGG
CACCGCCTCG GAACGGCCGA AGTCGAAAGC GCCCTCGTTG CCCATCCCGC CGTGGCGGAA
TCGGCGGTGG TCGGCTTCCC GCACGACATC AAGGGCCAGG GGATCTACGC CTACGTGACG
CTGAAGGCGA ACTGGGAACA TTCCGATGAG CTCCGCCAGG AACTCGTCAA GTGGGTTCGC
AAGGAGATCG GGCCCATCGC CACGCCCGAT TACATCCAGT GGGCGCCGGG CCTTCCCAAG
ACCCGGTCCG GCAAAATCAT GCGCCGCATC CTGCGTAAGA TCGCCGCCAA TGAAATCGAC
AACCTCGGCG ATACGACGAC CCTCGCCGAA CCGGCGGTGG TGGAAGACCT CATCAAGAAT
CGCCAGGCGG TCGCCTCGTC CGGCAAGGCG TAG
|
|---|
| Protein sequence | MAGNIFPVPE SWAKSAFCDN ETYLKMYEQS VKDPEGFWGE HAKRIDWFQP WTKVKSGSFE
GDVRFKWFEN GKLNVAYNCL DRNLAKRGDQ VAIIWEGDDP KVSKYITYRE LHDQVCRFAN
VLKAQGLKKG DRATIYLPMI PELAVAMLAC ARIGVVHSIV FAGFSPESLA GRILDCGGKV
VITADEGLRG GKPIPLKENT EEALKKCPDV QKVIVVKHTG GKVPVVPGRD VDWTEAIKAA
SPDCPPEVMD AEDPLFILYT SGSTGKPKGV LHTTGGYLVY TALSHQYVFD YHDGDIYWCT
ADIGWVTGHS YIIYGPLANG ATTVMFEGIP NYPDWSRFWN VVDKHKINIF YTAPTAIRAL
MRQGEAPVRA TSRKSLKLLG TVGEPINPEA WLWYYNNVGE QRCPIVDTWW QTETGGILIT
PLPGATALKP GSATRPFFGV QPAIIDPEGK MLDGPGSGYL IIKESWPGML RTVYGDHERF
KQTYFSNYPG LYFTGDGARR DEDGYYWITG RVDDVINVSG HRLGTAEVES ALVAHPAVAE
SAVVGFPHDI KGQGIYAYVT LKANWEHSDE LRQELVKWVR KEIGPIATPD YIQWAPGLPK
TRSGKIMRRI LRKIAANEID NLGDTTTLAE PAVVEDLIKN RQAVASSGKA
|
|---|
| |