Gene Sfum_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0583 
Symbol 
ID4460289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp709512 
End bp709883 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content59% 
IMG OID639701339 
Productresponse regulator receiver protein 
Protein accessionYP_844717 
Protein GI116748030 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.765018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA AACAATGCAC TGTCTTTGTC GCAGATGACG ACAAGTCCGT CCTCGAGTCT 
CTGGCGCTCC TGCTCGAATC GGCAGGATAT CAAAGCAGGG GGTTCGGCTC CGCGGAGGAG
TTGCTTGCAT CCGGCTCGGT GCAAAACGCC TGCTGCCTCA TTCTGGACAT CAAACTGCCC
GGAATGAGCG GGCTTCAGTT GTTGCAGGTC CTCGCCGCGT CACACACCCC GATTCCGGTG
GTCTTCATAA CCGGCCACGA CTGTCCCGGG ATTGAAGCGC AGGCCCTGGG GCTTGGAGCT
GTCGCCTATC TCCGGAAGCC GTTCGACGAG CAGATGCTTC TCGATGCGAT TCACCCGTAC
TGCGTGAATT GA
 
Protein sequence
MTWKQCTVFV ADDDKSVLES LALLLESAGY QSRGFGSAEE LLASGSVQNA CCLILDIKLP 
GMSGLQLLQV LAASHTPIPV VFITGHDCPG IEAQALGLGA VAYLRKPFDE QMLLDAIHPY
CVN