Gene Sfum_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0515 
Symbol 
ID4461627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp623865 
End bp625082 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content58% 
IMG OID639701271 
Producthypothetical protein 
Protein accessionYP_844650 
Protein GI116747963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.968569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA AGTGGGCCTT TGCACTCCTC GCGGTGACGG CATTGATCCT GCTGTCCCTG 
CTGACTTTCA TGATCAGCCA CATCCTCGCC CTGTCGGAGA TCCTGGGGAG AATACATCCT
GCCCTCGGGC TCGTTTCCAA TTGCCTGCTG CTGGGACTGC TGGCCCTGTG CCTTTTCTGG
CTCATCGGCG CTCACGTATT TCGTCAGAAG CCTCTAACCA TGCTCTCGAA TCCGAGCGCC
GCACAGAAAG AGCTGTATCT TGCGAAACTG TCCAAGAGGC TGGAATCCAA TAAATACATC
ATCGCAGGCG GCCTTCGCGC TTCTTCCGTG GACCGCCTCC CCGAATTGAC GGCTTACCTG
GACGACCTTG CCGTCCAGGA GATCAAGCTG GTCGGCAAGA GAGTATTCGT TGCAACGGCC
ATTTCCCAGA ACGGGCGGCT CGATTCGTTG ATCGTCTTCT TTCAGGTGGC CTCCCTGGTT
TGGAAGATAT CGCGCATTTA CAACCAGAGC CCGCACCCCA TGGAACTCTG GAAGATATAT
ACGAATGTCC TCACCGTTTC GCTCGTTTCC TACGGGCTGG ACGAAGCGGA TCTTGCCAAC
CAGATTGGAA GCATCATTTC CCCGATTATC CCCCACGCCG TCTTTGACAA GGTTCCGTTC
GTGGCCACGA TTGCCAGGAC GTTCTCTCAC TCCATTTTCA CCGGAGCGGC CAACGCCTCG
CTGGCATGCA GGGTGGGAGT GGTGACGAAG AACTACATCG GCCTCAAAAC CTGCCCGGAT
TCATCCGTGA AGCAGCGTCC TTCCCTGGAA GCTCTGCAGA TACTGAACGA GATTGTCGCC
GAGTCATTGC CGAAGGTCCT GGGTGCGCTG GGCGGGTCGA TCAAGAGTAT TTCCGCCAGG
GGCATGCGGA AAGCTTCCGG CGCGGTTGCG GACACCGCCA CCGGCTTTGC CGGCGGCCTG
GGGAATGCCT GTCAGGCCGT GGGCAGAAAA TCGAGCGATG CCTACAACTC GACGAAGCAC
GGCGCAAGGA AGGTTGCCGG AGCCGTCCGG TCCGTTTATG ACGCCGTGGG AGACAAAGCC
GGTGACGTTT TCGAGGCAAC CGCCGGCGGA GTGAAGAAAG TCTCCTCCAC GGCCGCCGGT
GTCGCCGGGA AAGCCGTTGC GGGTCTCAAG AAGCCGGTGC GCAGGATTTC ATCCTTCTTG
TTCAGGAACA GTGAATAA
 
Protein sequence
MKKKWAFALL AVTALILLSL LTFMISHILA LSEILGRIHP ALGLVSNCLL LGLLALCLFW 
LIGAHVFRQK PLTMLSNPSA AQKELYLAKL SKRLESNKYI IAGGLRASSV DRLPELTAYL
DDLAVQEIKL VGKRVFVATA ISQNGRLDSL IVFFQVASLV WKISRIYNQS PHPMELWKIY
TNVLTVSLVS YGLDEADLAN QIGSIISPII PHAVFDKVPF VATIARTFSH SIFTGAANAS
LACRVGVVTK NYIGLKTCPD SSVKQRPSLE ALQILNEIVA ESLPKVLGAL GGSIKSISAR
GMRKASGAVA DTATGFAGGL GNACQAVGRK SSDAYNSTKH GARKVAGAVR SVYDAVGDKA
GDVFEATAGG VKKVSSTAAG VAGKAVAGLK KPVRRISSFL FRNSE