Gene Sfum_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0495 
Symbol 
ID4461572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp595879 
End bp596649 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content60% 
IMG OID639701251 
ProductABC transporter related 
Protein accessionYP_844630 
Protein GI116747943 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0931596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.520418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG TCAGGGGAGT CACCTTTTCT CACAACGGGT CGCGGGAGAC GGTCCTGCGC 
GAGATCGATT TTCTTGCCCG CGGGGGTGAA ATCACGGCGG TTCTCGGCCC CAACGGCTCC
GGGAAAACGA CGCTTTTCCA ATGCCTGCTG GGGATCTGGA AATTTCAGAA AGGGGACGTG
CTGTTCGAAG GGGAATCGAT GAAGCATTTG AAACGAGTGG AAATCGCCAG AAGAATCTCC
TCGGTGCCCC AGGAGCACGA GCCCCCGTTT CCCTACACCT GCTTCGACAT TGTGCTCATG
GGGAGAACGG CCCACGTGGA CGTGTTTTCG TCGCCGGGGG AAAAGGACTC GGACCTGGCC
CACGAGGCGA TGGAAGCCCT CGGCATTCGT CACCTGGCTT CCCGCCCGTA CACCAGGGTG
AGCGGCGGGG AACGGCAGAT GGTGCTCGTG GCCCGCTGCC TGGCTCAGAA CGCGCCGGTG
ATGCTCCTCG ACGAACCTTC CGCTCACCTC GATTTCAGGA ATCAGAACCT GATCCTGGCC
AAAGTGAAGC AGATCGTGCG GGAAAGAGGC TTGACGGTCA TCATGAATCT TCACGATCCC
AACATGGCCC TCATGTTTTC CGACCAGGTG CTTCTCCTGA AGCAGGGGCG GCTCATCGCG
CACGGAACGC CCGACGATGC GATCACCCGG AAGAATCTCT GGGACGTCTA CGGGCTGGAA
GTCGAGTTCC TCACGGGCAG CGGATTGCGG ATGATATGCC CGAGAATCTG A
 
Protein sequence
MIEVRGVTFS HNGSRETVLR EIDFLARGGE ITAVLGPNGS GKTTLFQCLL GIWKFQKGDV 
LFEGESMKHL KRVEIARRIS SVPQEHEPPF PYTCFDIVLM GRTAHVDVFS SPGEKDSDLA
HEAMEALGIR HLASRPYTRV SGGERQMVLV ARCLAQNAPV MLLDEPSAHL DFRNQNLILA
KVKQIVRERG LTVIMNLHDP NMALMFSDQV LLLKQGRLIA HGTPDDAITR KNLWDVYGLE
VEFLTGSGLR MICPRI