Gene Sfum_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0464 
Symbol 
ID4460273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp558393 
End bp559178 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content59% 
IMG OID639701220 
Productband 7 protein 
Protein accessionYP_844599 
Protein GI116747912 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000381687 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0261811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG GCGTGTACAT TGTGGTTGTG CTGGCCGTGC TGTTTCTCGC AACTGCCATT 
CGCGTTTTGA ACGAATACGA GAGGGGCGTG ATTTTTCGGC TGGGCCGGGT GATACGGGCG
AAGGGGCCGG GCCTGATCAT ACTCATTCCG ATGGTCGACC GCATGCAGAA GGTCAGTTTG
CGCCTCGTGG CCGCGGATGT GCCCGCTCAG GACGTCATCA CGCGCGACAA CGTTTCGGTC
AAGGTCAGCG CGGTGATCTA TTTCAGGGTT GTGGACCCGG TGAAGGCGGT CATTTCCGCG
GAGAATTATC TTTACGCCAC CAGTCAGCTG GCTCAGACAA CGCTGCGAAG CGTCTGCGGC
CAGGGAGAGC TGGACGATCT GCTTGCGGAA AGAGACAAGA TCAATTCGCA CATCCAGGAG
ATACTCGACC GTCATACCGA GCCATGGGGC GTGAAGGTGT CCGTTGTCGA GCTCAAGCAT
ATCGACCTGC CCCAGGAGAT GCAGCGGGCC ATGGCGAAGC AGGCGGAAGC CGAGCGTGAA
CGCCGCGCCA AGATCATCGG GGCGGAAGGT GAATTCCAGG CGGCGTCCCG GCTGTCGGAA
GCGGCGAAGA TCATCCAGGA ACATCCCGTG GCGATCCAGC TCCGGTACCT GCAGACCTTG
AGGGAGATTT CGTCCGAAAA CAATTCCACC ACGATCTTCC CGATACCCAT CGACCTTTTC
AGGCCGTTCA TACGCCTGGC CGAACTCTAC GACAGGAAAC AGGAAAAGGA GCAGCCAATT
GGGTAA
 
Protein sequence
MPIGVYIVVV LAVLFLATAI RVLNEYERGV IFRLGRVIRA KGPGLIILIP MVDRMQKVSL 
RLVAADVPAQ DVITRDNVSV KVSAVIYFRV VDPVKAVISA ENYLYATSQL AQTTLRSVCG
QGELDDLLAE RDKINSHIQE ILDRHTEPWG VKVSVVELKH IDLPQEMQRA MAKQAEAERE
RRAKIIGAEG EFQAASRLSE AAKIIQEHPV AIQLRYLQTL REISSENNST TIFPIPIDLF
RPFIRLAELY DRKQEKEQPI G