Gene Sfum_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0383 
Symbol 
ID4461616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp459107 
End bp459832 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID639701138 
ProductABC transporter related 
Protein accessionYP_844518 
Protein GI116747831 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTCGAG TCAAGGGTCT ATCGGTTCGC TACGGTTCGG TCCAGGTCCT GAGGCGGGTC 
AGTTTTCACG TGGCCGAAAA CGAGATCGTC GCCCTGATCG GGGCCAACGG CGCGGGCAAG
AGCACTCTCC TGCGGGCGCT GTCCGGCATC AACCGGCCCT TTGAAGGGGA GATTTTGTTC
AGGGGCGAGC CGCTCCTGAA AGTCAGCCCC GAGCGCATCG TCCGCATGGG GCTGGTTCAG
GTGCCCGAAG CCCGGCAGTT GTTTCCGAAC ATGACGGTGC TCGAGAACCT CGAACTGGGG
GGGTACCTTT ACGGTCTCAA GCACGTGCGC GCCAAGCTGG CGGAAATCTA CGAGCTGTTT
CCCGTCCTGA TGGAGCGCAG CAGGCAGAAG GCGGGAACCC TCAGCGGCGG GGAGCAGCAG
ATGCTCTCCA TCGGCCGCGC CCTGATGGCC CGGCCGCGAC TGCTCGTCCT GGACGAACCG
TCGATGGGGC TGGCCCCCCT GATTGTCGAG GAGATCTACC GGACCGTCGA GGCGTTGCAT
CGTGAGGGCA CCACCGTTCT GCTGGTCGAA CAGAACGCCA TGGGGGCGCT GGCCGTGGCG
GAACGCGGGT ACGTCCTCGA GACCGGGCGC ATCGTCCTCT CGGGCAGGGC CGATGAGCTT
ATGGAGCACG ACGATGTCCA GAGGGCTTAC CTCGGCAAAG ACTACGAATA CAAATGGGAG
AGGTAG
 
Protein sequence
MLRVKGLSVR YGSVQVLRRV SFHVAENEIV ALIGANGAGK STLLRALSGI NRPFEGEILF 
RGEPLLKVSP ERIVRMGLVQ VPEARQLFPN MTVLENLELG GYLYGLKHVR AKLAEIYELF
PVLMERSRQK AGTLSGGEQQ MLSIGRALMA RPRLLVLDEP SMGLAPLIVE EIYRTVEALH
REGTTVLLVE QNAMGALAVA ERGYVLETGR IVLSGRADEL MEHDDVQRAY LGKDYEYKWE
R