| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0281 |
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| Symbol | |
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| ID | 4461070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 335354 |
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| End bp | 337420 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639701036 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_844417 |
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| Protein GI | 116747730 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.113851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACG AAGAGAAAAG CAGGGAGCAA CTCATCCGTG AACTGGAGGA GATGCGCCGG
CGCCTGGGCC GGCAGGATAA GGAACTGGCG GAGCTGAAAG GCATGGAGGA AGCTCTGCGG
GAAAGTGCCG GGCGATACCG CCAGATGGCG GAAAACATAA GGGAGGTCTT TTGGATGGCC
GACCTCCAGG AGAGCCGGAT GCTGTATATC AGCCCCGCCT ACGAGGGGGT GTGGGGCCGC
ACATGCGACA GCCTCTATGC GAATCCCACG TCCTGGATGG AAGGGATACA CCCGGCCGAT
CGGGAGAGGG TTGACGAGCT ACTGGCGCAA AGGGCCAGCG GGGGATACAG CGTCGAATAC
CGGGTCGTGC GTCCCGACGG TTCGGTTCGC TGGGTGCTGG ACCGCGGGTT TCCCATTAGC
GATGCGGCAG GGACGCCCTA TCGTATTGCG GGGATCGCGG AGGACATAAC CGACCGCAAG
AATGTGGAAG CGGAACTTCA TGAATACCGC GACCGCCTGG AGGATCTGGT GAAGGAGCGC
ACCGCCGATT TGGCGAGGGC GAACGAACAG CTCACGCACG AAATCGAAGA GCGGAAGAAG
GCCGAACAGA AGCTGCGCGA ATCGCAGCAA ATGCTGCAGT CCGTCCTGGA CACCATTCCC
GTAAGGGTAT TCTGGAAGGA CTTCGATTCG AACTACCTGG GCTGCAACGG CCCGTTTGCG
CGCGACGCGG GTCTGCAGTC GCCGGAAGAG ATCGTGGGGA AGAACGACCT TGTGATGATC
TGGGCGGACC TGGCGGAGCT CTACCGCGCG GATGACCGCA TGGTGATGGA AACCGGCAGG
CCGAAACTCG GATACGAAGA GCCCCAGACG ACGCCGTCCG GCGGCCGGGT ATGGCTGCGC
ACGAACAAGG TCCCCCTGCT CGATTCCGAA GGCAGGATCA AAGGCGTCCT CGGGACTTAC
GAAGATATTA CTGAGAGTAA GCGTATCGAG GAAATGCTGC GGGTTTCCGA AACCAAGTAC
AGAATAGTCG CCGACAACAC GCACGACTGG GAATACTGGA TGAGTCCCGA GGGCCGGTTC
CTGTACATTT CTCCGTCCTG TGAAAGGATC ACCGGCTACC CGGCGGGCGC GTTCGAGGCG
GATCCCCGGT TGCTTTCCCG CATCGTTCAC CCCGACGACG TCAACCGTTT CAACGCCCAC
GTGGCCATGG ATCGGACGGC GCATACACGA CACGGGCTGG AGTTCCGCAT CATCAATCGG
GATGGGGCGA CGCGGTGGAT CGGACACCTC TGCCAACCGG TGTTCGATGA AAAGGACTGC
TTTATGGGCC GCCGCGGGAG CAACCGCGAC ATCACCGACC GAAAGCTGGC GGAGGAAGCG
CTTCAGGACA GTGCGGAAAA ACTGAAGCTG TTCGCCTATT CCGTCGCCCA CGATCTCAAG
AGTCCGGCGA TCGGCATCTA TGGCCTGACA AAACGACTGA ACAGGAATTA CAGGAGCCTC
CTCGACGAAA AAGGGAAGGT CTGTTGCGAT CAGATCCTGA GGACTTCGGA GCACATCGCT
GCCCTGGTCG ACAAGATCAA TGTCTACATA GCGACGAAGG AAGCCCCCCT TGCCATTGAA
GAAATCAACA TTGCGGAAAT CATCAGGATG CTGAGGGACG AGTTCTCCGC GCAACTGAGC
CTGCGCCGCA TAGACTGGCT CGAACCCGAG GCCCGGATTG AAATCAGGGC GGATCGCGTG
GCCATGCTGA GGGCCTTCAG GAATTTCGTC GACAACTCAT TGAAATACGG AGGGGAAAAG
CTGAGCACGA TCCAGACCGG GTATGAGGAA TCGGAGGATT TCCACATCTT TTCATTCAGC
GATAACGGAA AAGGTTTGAA AGAGGGGGAT GCCGAAAGAA TCTTCGGGGC GTTTCAACGG
AATCCGGCCT CGAAAGGAGT CGAGGGGGCG GGATTGGGCC TCGCCATCGT GAAGGAAATA
GCGGCGCAAC ACAGCGGCCG GGTGTGGGTG GAACCGAGGG CGAAAAGGGG AATCACGTTC
TGCATGTCCA TCTCCAAGAA CCTGTAA
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| Protein sequence | MQDEEKSREQ LIRELEEMRR RLGRQDKELA ELKGMEEALR ESAGRYRQMA ENIREVFWMA
DLQESRMLYI SPAYEGVWGR TCDSLYANPT SWMEGIHPAD RERVDELLAQ RASGGYSVEY
RVVRPDGSVR WVLDRGFPIS DAAGTPYRIA GIAEDITDRK NVEAELHEYR DRLEDLVKER
TADLARANEQ LTHEIEERKK AEQKLRESQQ MLQSVLDTIP VRVFWKDFDS NYLGCNGPFA
RDAGLQSPEE IVGKNDLVMI WADLAELYRA DDRMVMETGR PKLGYEEPQT TPSGGRVWLR
TNKVPLLDSE GRIKGVLGTY EDITESKRIE EMLRVSETKY RIVADNTHDW EYWMSPEGRF
LYISPSCERI TGYPAGAFEA DPRLLSRIVH PDDVNRFNAH VAMDRTAHTR HGLEFRIINR
DGATRWIGHL CQPVFDEKDC FMGRRGSNRD ITDRKLAEEA LQDSAEKLKL FAYSVAHDLK
SPAIGIYGLT KRLNRNYRSL LDEKGKVCCD QILRTSEHIA ALVDKINVYI ATKEAPLAIE
EINIAEIIRM LRDEFSAQLS LRRIDWLEPE ARIEIRADRV AMLRAFRNFV DNSLKYGGEK
LSTIQTGYEE SEDFHIFSFS DNGKGLKEGD AERIFGAFQR NPASKGVEGA GLGLAIVKEI
AAQHSGRVWV EPRAKRGITF CMSISKNL
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