Gene Sfum_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0229 
Symbol 
ID4461305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand+ 
Start bp269699 
End bp270307 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content61% 
IMG OID639700984 
Productnitroreductase 
Protein accessionYP_844365 
Protein GI116747678 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.04731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.433886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGA AGAAAATGCA GCCGATCAAG CTGTCCCATC CGAGGACGAG AGGTTCGGTT 
TCCATCGAGG AGGCTCTGCT CAAGAGGAGA TCGGTCCGAA GCTACACGGG GGTGCCGCTT 
TCCATCGAGG ATCTGTCCCA GTTGCTCTGG GCGGCACAGG GAATGAGCCA CCCCAGGGGG 
TATCGTACCG CTCCGTCGGC GGGAGCGCTG TATCCGCTTG AGCTTCTCGT CGCGGCGGGG 
CGTGTCGGAG CCCTGTCTCC GGGTGTCTAC CGGTACGATC CGCATCGCCA TGAAATCGTG 
CTCCACCGTG AGGGCGACAG GCGCGCAAAT CTGCGCCGTG CATCCTTGGA TCAGTCTGCG 
GTGGGGAATG CCCCGGCCGT GCTGATATTC TGTGCCGTTT ATGAAAGGAC GACGCGCAAA 
TATGGAGAAC GCGGAGTCAG GTATGCGATG ATGGAAGCCG GGCATGCAGC TCAGAACGTG 
CATTTGCAGG TGGTGAGCCT GGGCCTTGGA ACGGTGTTGA TCGGAGCGTT TCGGGATGAC 
CAGGTGAAAA GCGTGCTGGA GCTCGGCGGG AATGAGGAGC CGCTTTACCT GATGCCGGTC 
GGCAAATGA
 
Protein sequence
MAEKKMQPIK LSHPRTRGSV SIEEALLKRR SVRSYTGVPL SIEDLSQLLW AAQGMSHPRG 
YRTAPSAGAL YPLELLVAAG RVGALSPGVY RYDPHRHEIV LHREGDRRAN LRRASLDQSA 
VGNAPAVLIF CAVYERTTRK YGERGVRYAM MEAGHAAQNV HLQVVSLGLG TVLIGAFRDD 
QVKSVLELGG NEEPLYLMPV GK