Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0207 |
Symbol | |
ID | 4461470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 239453 |
End bp | 241411 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639700961 |
Product | proton-translocating NADH-quinone oxidoreductase, chain L |
Protein accession | YP_844343 |
Protein GI | 116747656 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.306376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.261941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAAT TGCTTAAAGA CCCGGTATTG TTGGCCGTAG TCATGGGAGC GACGCTTCCA TTTCTGGCCA TGGCGGTGAT TCTGATCTTT ACGCGCCATA ACCCGCGCCT TTCGAGCTTC ATCTCCATCG GCGCGGTGAC CGTTTCCGTC TGCGCGGCGC TTTATCTCCT CTACAAGCTG CATGGGGCCG GCCGGCCCGT TCAATATCAG ACCGAATGGC TTTCATCGGA CACGCTGGTC GTTCCGTTCG GATACCTGCT GGACCCCCTG AGCCTCCTGA TGCTCGCCAT CGTGGCGTGC ATCAGTTTCC TCGTGCAGGT CTATTCCATC GGGTACATGG CGGGGGACAC CGGCTACAGC CGCTACTACG CCTTTCAGTC CCTGTTCGCA TGGGCCATGA TGAACATGGT GATCGCTCCG GGCATGCTCC AGTTGTTCAT CTTCTGGGAA CTGGTCGGGT TGGCGTCCTA CCTCCTGATC GGCTTTTACT ACGACAAGGA AAGCGCCTCC CAGGCCGGCA AGAAGGCTTT CGTGATGACC CGCCTGGGCG ATCTCGGATT CTTCCTGGGC CTGATCGTTC TGACGCTCGG TTTCGGCAAC CTCGGGATCC TGGACCTGAA TGAGGCCGCT CGGACGCACC AGATCTCGCA ACTGCTCATG ACCGTTTCCG CTTTGCTCAT CTTTGGGGGC GTGATCGGCA AAAGCGCTCA ATTCCCGCTC CTCACCTGGT TGCCCGACGC GATGGAAGGT CCCACTCCGG TCAGCGCGCT GCTCCACTCC GCGACGATGG TGGCCGCGGG CGTGTATATG TTCAGCCGGA TTTTTCCGCT TTTTGCGGCA TCTCCCGATG CAATGGCCAT GGCCCTTGCC ATCGGCACGG CGACAATGCT GCTTTCCTCG ACCATGGCCA TGGTCACCTA CGACATCAAA CAGGTCTGGG CCTATTCCAC CATCAGTCAA CTGGGGTTCA TGGTCATGGC TCTGGCTGCC GGCGGGTATT TCGCCGGAGT CTTTCACCTC ACCACCCACG CGGGCTTCAA AGCCCTGCTG TTTCTTTGTT CCGGCATCTT CATTCACGAG TATCACAGCA ACGACATGAG GCTGATCGGA AAGGGCGGAG GGCGACGGTT GGTGATCCCG ATGGCGTGCA TGACCGTCGG GGCGCTGGCG TTGTCCGGTC TGCCTCCGTT CTCCGGTTTT TTCAGCAAGG AGGCCATCCT GGGCGTGCTC GCCGCCCATC CCAATAAACT CTGGCTTGCG GCGGGGCTGC TCGGCGCCCT GATGACCGCC TATTACAGCT TCCGGCTGAT CTTCTTCATT CTTTTCCCCC GGGGTGGAAT CGAAACACCT CACGGTCACT CGCAAGGTCA CGAACATGAG GCGCACGCGG GCGGGCACGG CGGGCTGATT TTCTGGGCCA TGGCGGTACC CGTGATGATC CTGGCGACCC TTACCCTGTT CCTCGGCTTC TTCCAGAGTT CCATCGAGCA TTTCCTGACC GGGAATGCCG GCCGGCTTGC GGCCGCCGCC CACGGGGCGG CCCAGGAAGC AGGAAAGGCG GCCCATGACG GCCACGGAGC CGGGCACTAC GTCTTGCTCG TGTTCGCGGT CTGCATGGCT TTGGGCGGGC TTGGCTGGGC CTGGGTGGAG TTCGGCCGGA AGAAGGCCGC GCAGGTAGGT TTTCTCGGCC GGTTTCCCAG GATGTGGGAT TTGTTTGCGG AACGCTGGTA CCTGGATCGA CTGTATCGGC AGTTCCTGGA CAGAGGGATT TACGCCGGGA TAACGAGCCT CTTCACCCGG AACGACCGGC GCGTGATCGA CGGGGGCATC GACGGCCTGT GTTTCTTTAC GGTGACCGGC GGGCGATTGT TCAGTTTTCT CCAGTCGGGC ATGCTGCAGT ACAACCTGTT GGTCATGATC GGCGGGGTAG GTGTCGTGGT TCTCCTGTTC CTCGTGTAG
|
Protein sequence | MTELLKDPVL LAVVMGATLP FLAMAVILIF TRHNPRLSSF ISIGAVTVSV CAALYLLYKL HGAGRPVQYQ TEWLSSDTLV VPFGYLLDPL SLLMLAIVAC ISFLVQVYSI GYMAGDTGYS RYYAFQSLFA WAMMNMVIAP GMLQLFIFWE LVGLASYLLI GFYYDKESAS QAGKKAFVMT RLGDLGFFLG LIVLTLGFGN LGILDLNEAA RTHQISQLLM TVSALLIFGG VIGKSAQFPL LTWLPDAMEG PTPVSALLHS ATMVAAGVYM FSRIFPLFAA SPDAMAMALA IGTATMLLSS TMAMVTYDIK QVWAYSTISQ LGFMVMALAA GGYFAGVFHL TTHAGFKALL FLCSGIFIHE YHSNDMRLIG KGGGRRLVIP MACMTVGALA LSGLPPFSGF FSKEAILGVL AAHPNKLWLA AGLLGALMTA YYSFRLIFFI LFPRGGIETP HGHSQGHEHE AHAGGHGGLI FWAMAVPVMI LATLTLFLGF FQSSIEHFLT GNAGRLAAAA HGAAQEAGKA AHDGHGAGHY VLLVFAVCMA LGGLGWAWVE FGRKKAAQVG FLGRFPRMWD LFAERWYLDR LYRQFLDRGI YAGITSLFTR NDRRVIDGGI DGLCFFTVTG GRLFSFLQSG MLQYNLLVMI GGVGVVVLLF LV
|
| |