Gene Sfum_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0205 
Symbol 
ID4461468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp238615 
End bp239142 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content60% 
IMG OID639700959 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_844341 
Protein GI116747654 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.723775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.402177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCT TGACTGGAAT GGATGCGGCG GCCCACGCGG GGTTCTGGAT CGTCGTCGGC 
CTGACTCTGG CGGGAGCCTC TTTCGCGGTG TTCCCGCGCA ACATCCTCCA CAACGTCCTC
GGTCTCATCC TGGCCTTGTC CGGGATCGGC GGCCTCTATC TTTCGCTCGG CAGCTTCTTC
ATGGGGCTCA TGCAGTTGCT CATTTACGTC GGAGCAATCT GCGTCGCCAT TGTCTTCGCC
ATCATGCTCT CCCGCCCGCT GCACCTCGAG GTGCCCAAAA GAGAGGCGCC TAAAGTGGCC
ATGGCGGTAG CGACGAGCGT TGTCTTCCTG GTGGCCATGG TGGGCGTTGT CCTGAGGACC
AACTGGGTGC CGGCCGTCGA GCGCGGAACG GATTGGTCGG TGGAAGCCAT CGGGGACTTG
CTGCTCACGC GTTACGCCCT CGTCTTCGAA GTCATTTCCT TGATTCTGCT GATCGCCATC
ATCGGTGCGA TCATCACGGC CGGATTCAGC AGGAGGTTGA GTTCATGA
 
Protein sequence
MNVLTGMDAA AHAGFWIVVG LTLAGASFAV FPRNILHNVL GLILALSGIG GLYLSLGSFF 
MGLMQLLIYV GAICVAIVFA IMLSRPLHLE VPKREAPKVA MAVATSVVFL VAMVGVVLRT
NWVPAVERGT DWSVEAIGDL LLTRYALVFE VISLILLIAI IGAIITAGFS RRLSS