| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0179 |
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| Symbol | |
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| ID | 4461651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 215795 |
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| End bp | 216802 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639700934 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_844316 |
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| Protein GI | 116747629 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.293333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC TGGTCACCGG CGCCGCGGGC TTTATCGGAT ACCACCTGGC ATATCGGCTT
CTCAAAGACG GAAACACCGT AATCGGTCTG GACAATGTCA ACGATTACTA TGACGTCAAC
CTGAAGCGGA ACCGTTTGAA ACGGCTTGCG CCGTTTCAAA GCTTTGCTTT CCTGAAGCTC
GACCTGCACG ATACGGCGGG CATCGAAGCC ATGTTCAGGG AGAATGCCTT CGATGCCGTC
GTGCACCTGG CCGCCCAGGC CGGTGTGAGG CATTCGCTGA CCCATCCGCA TTCCTACGTC
GAGAGCAATC TCACCGGCTT CGTGAATATT CTCGAAGGGT GCCGACACCA CCGGATCAAG
CACCTCGTCT TCGCTTCGTC GAGCTCGGTC TACGGCGCCA ACGTCGTCAT GCCCTTGTCG
GTACACCACA ACGTCGACCA TCCCCTCTCG CTCTACGCCG CCACAAAAAA AGCCAATGAG
CTCATGGCAC ACACTTACGC TCATCTTTTC GGCGTCCCCT GTACCGGGCT GCGCTTCTTC
ACCGTTTACG GCCCCTGGGG GCGACCCGAC ATGGCCCTGT TTCTCTTCAC CCGCGCGATC
CTTGCGGGAG AGCCCATCAG GATATTCAAC TACGGCAGGA TGCGACGGGA TTTCACCTAT
ATCGACGACA TTATCGAGGG CGTGGTGAGA ATGATCCCCG CGCCCCCCTC ACCCAACCCG
CAATGGGATC GCGAATCATC GGACCCGGCC ACGAGCTACG CCCCTTACCG GGTGTACAAC
ATCGGCAACA ACCGGCCCGT GGAGCTGATG GAGTACGTGG CGGCCATCGA AAGCTGCCTG
GGGAAGGAAG CACAAAAGGA ATTCCTGCCG CTCCAGCCGG GGGACGTTCC GGCAACCTGC
GCCGACGTCA GCGACCTGGA GCGGGATTTC GGGTTCCGGC CAAGCACCAC GATTCAGGAA
GGAATCACGC GGTTCATCGA ATGGTACAGG GCTTACTATT CGGTGTAA
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| Protein sequence | MNILVTGAAG FIGYHLAYRL LKDGNTVIGL DNVNDYYDVN LKRNRLKRLA PFQSFAFLKL
DLHDTAGIEA MFRENAFDAV VHLAAQAGVR HSLTHPHSYV ESNLTGFVNI LEGCRHHRIK
HLVFASSSSV YGANVVMPLS VHHNVDHPLS LYAATKKANE LMAHTYAHLF GVPCTGLRFF
TVYGPWGRPD MALFLFTRAI LAGEPIRIFN YGRMRRDFTY IDDIIEGVVR MIPAPPSPNP
QWDRESSDPA TSYAPYRVYN IGNNRPVELM EYVAAIESCL GKEAQKEFLP LQPGDVPATC
ADVSDLERDF GFRPSTTIQE GITRFIEWYR AYYSV
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