| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0099 |
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| Symbol | clpX |
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| ID | 4461380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 120691 |
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| End bp | 121944 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639700854 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_844237 |
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| Protein GI | 116747550 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000164599 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAGGA AGCGGGATGA TCGAGGCGGG GAGCTGCGCT GCTCTTTTTG CGGGAAGAGC
CAGGACGAGG TCAAGAAACT GATCGCCGGG CCCACGGTTT ACATTTGCGA TGAGTGCGTG
GAGTTGTGCA ACGACATCAT CGCGGAGGAG TACGAGCGCG AGGAAGCGGC CCGTGCCACC
CAGATTCCCA AGCCGGCCGA GATCAAAGCC ATACTCGATC AGTACGTGAT CGGCCAGGAT
CGGGCCAAGA AGATACTCTC CGTTGCGGTG CACAACCATT ACAAGCGCAT CGAACTGAAA
ATCGACAAGA ACGACGTCGA ACTGCAGAAG AGCAACATCC TGATGATCGG CCCCACCGGG
TCGGGAAAAA CGCTCCTCGC ACAGACGCTG GCCCGCATTC TGAACGTGCC CTTCACCATC
GCCGACGCGA CGACCCTCAC CGAAGCGGGG TACGTGGGCG AGGACGTCGA AAATATCCTG
GTGAGCCTCA TCCAGGCTGC CGATTATGAT ATCGAGAAGG CATCCCGCGG GATCGTCTAC
ATCGACGAGA TCGACAAGAT CGCGAAGAAA TCGGACAGCC CATCCATCAC CCGGGACGTT
TCCGGGGAGG GCGTTCAGCA GGCATTGCTC AAGATTCTCG AGGGGACGGT CGCCAATGTT
CCGCCCAAAG GGGGGCGCAA ACACCCGCAA CAGGAATTCA TCAAGATCGA CACCACCAAC
ATCCTGTTCA TCTGCGGCGG CGCCTTCAAT TACCTCGAAA CCATCATTCA GTCGCGGGTG
GGCGTCAAGG GAATGGGTTT CGGAGCCGAA ATCAGGAGCA AGGAGGACAA GAGCGTCGGG
GAGATCCTGA TCAAGGTGCA GCCCGAAGAT CTCCTCAAAT TCGGGATGAT CCCCGAGTTC
GTCGGGCGCC TGCCGGTCAT CGCGACACTC AACGAGCTCA CGGAGGACGA GCTGGTCAGC
ATCCTGACCG AGCCCAAGAA TGCGCTCGTC AAGCAATACA AGAAGCTTTT CGAACTGGAA
GACGTTCGCC TGAGGTTCAC CGAAGGGGTG TTGCGGGCCA TCGCCAAGGA AGCCATCAGG
AGGAAATCCG GAGCGAGAGG ATTGCGGTCC ATCATGGAAA ACATCATGCT CGACATCATG
TACGATCTTC CCTCGCACCC GGAGATTCAG GAATGCATCA TTAACGAAGA CGTGCTCGTG
AAGCAGGCCA AGCCGCTGCT GCTCTACCGC AACCAGAGCC AGGAATCGGC ATAG
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| Protein sequence | MARKRDDRGG ELRCSFCGKS QDEVKKLIAG PTVYICDECV ELCNDIIAEE YEREEAARAT
QIPKPAEIKA ILDQYVIGQD RAKKILSVAV HNHYKRIELK IDKNDVELQK SNILMIGPTG
SGKTLLAQTL ARILNVPFTI ADATTLTEAG YVGEDVENIL VSLIQAADYD IEKASRGIVY
IDEIDKIAKK SDSPSITRDV SGEGVQQALL KILEGTVANV PPKGGRKHPQ QEFIKIDTTN
ILFICGGAFN YLETIIQSRV GVKGMGFGAE IRSKEDKSVG EILIKVQPED LLKFGMIPEF
VGRLPVIATL NELTEDELVS ILTEPKNALV KQYKKLFELE DVRLRFTEGV LRAIAKEAIR
RKSGARGLRS IMENIMLDIM YDLPSHPEIQ ECIINEDVLV KQAKPLLLYR NQSQESA
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