Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_4047 |
Symbol | |
ID | 4280938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4827391 |
End bp | 4828932 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136872 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_752711 |
Protein GI | 114565197 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.145549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAGC AGCGGATCCA GCAGTTCGAC GTCGTTAGTG AAGCTCGCAA CGAAGGTACA ATCGTTGCAG TAAGTGACGG CATCATTCGC ATTAACGGCC TAGCCGATGT AATGCAAGGT GAAATGATCG AACTGCCTGG TGGCTGTTTT GCAATCGCGT TGAATTTAGA ACGTGATTCT GTCGGCGCCG TAGTGATGGG GCCTTATGCT AATTTAGCAG AAGGCGATAA AGTAAGAACC ACTGGTCGTA TTCTTGAAGT ACCGGTGGGT CGTGGTCTAC TTGGCCGCGT TGTTAACACT CTAGGTGAGC CTATTGACGG AAAAGGACCT ATCGACAACG ATGGTTTCTC TCCTGTTGAA GTGATTGCCC CTGGTGTTAT TGAACGTAAG TCAGTATCAC AACCAATTCA AACTGGTTAT AAAGCCGTTG ATGCCATGAT CCCTATTGGT CGTGGTCAAC GTGAATTGAT TATTGGTGAC CGTCAGACTG GTAAAACAGC GATGGCAATC GATGCAATTA TCAACCAGAA AGAATCAGGC ATTAAGTGTG TCTATGTAGC TATTGGTCAG AAAGCTTCTA CCATCGCTAA CGTAGTACGC AAGCTTGAAG AACATGGTGC ATTAGCTAAC ACTATTGTTG TTGTTGCTTC AGCTTCTGAA GCTGCTGCAC TGCAATACTT AGCGCCATAT TCTGGTTGTT CTATGGGTGA ATACTTCCGT GACCGCGGTG AAGATTCTTT AATCGTATAT GATGATTTGT CTAAGCAAGC AGTTGCTTAT CGTCAAATTT CATTACTATT GAAGCGTCCA CCAGGACGTG AAGCATACCC AGGTGACGTT TTTTATCTAC ACTCTCGTTT ATTAGAGCGT GCTTCACGCG TAAACGTGAA TTATGTAGAA AAGTTCACTA AAGGTGCAGT AACAGGTCAA ACTGGTTCGT TAACCGCTTT ACCTATTATT GAAACCCAAG CTGGTGATGT ATCAGCGTTC GTACCGACCA ACGTAATTTC TATTACAGAT GGTCAAATCT TCCTTGAAAC TGATTTGTTT AACTCAGGAC TACGTCCAGC AGTTAACCCA GGTATTTCTG TTTCTCGTGT TGGTGGTGCT GCGCAGACTA AAATCATCAA GAAACTGTCT GGTGGTATTC GTACTGCACT TGCACAGTAT CGAGAGCTTG CTGCGTTCTC ACAGTTTGCG TCTGATTTAG ATGATGCAAC TCGTGCTCAA CTTGAGCATG GTGAGCGTGT AACCGAATTA ATGAAGCAAA AGCAATATGC TCCTATGAGC GTTGCTGCCC AGTCTGTGTC TATTTTCGCA GCTGAAAAAG GCTACCTTAA AGGTGTTGCT TTAAATGAAA TCGGTCGCTT CGAGGCCTCT CTGCTTTCAT ACATGAACAG TCAACATACT GACCTAATGA ACACCATCAA TGCTACTGGC GATTATAACG CTGATATCGA AGGTGAGTTA AAGGCAGGCA TGGACAAGTT CATTGAAACC CAAACCTGGT AA
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Protein sequence | MQLNSTEISD LIKQRIQQFD VVSEARNEGT IVAVSDGIIR INGLADVMQG EMIELPGGCF AIALNLERDS VGAVVMGPYA NLAEGDKVRT TGRILEVPVG RGLLGRVVNT LGEPIDGKGP IDNDGFSPVE VIAPGVIERK SVSQPIQTGY KAVDAMIPIG RGQRELIIGD RQTGKTAMAI DAIINQKESG IKCVYVAIGQ KASTIANVVR KLEEHGALAN TIVVVASASE AAALQYLAPY SGCSMGEYFR DRGEDSLIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER ASRVNVNYVE KFTKGAVTGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ LEHGERVTEL MKQKQYAPMS VAAQSVSIFA AEKGYLKGVA LNEIGRFEAS LLSYMNSQHT DLMNTINATG DYNADIEGEL KAGMDKFIET QTW
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