| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4001 |
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| Symbol | |
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| ID | 4280892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4768712 |
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| End bp | 4769929 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136822 |
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| Product | major facilitator transporter |
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| Protein accession | YP_752665 |
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| Protein GI | 114565151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCTGG ATTCATTGCG TTCCTTATCA CCATCGATAA AGCAGTATTT ACTGATCACT
GGTAATTACT GGGCATTTAC CTTAACCGAT GGCGCTTTGC GTATGCTGGT GGTGTTGTAT
TTCCATCAAT TGGGTTACAG CCCGTTAAAT ATTGCAATGT TGTTTTTGTT TTATGAGATT
TTTGGCGTAG TGACTAATCT TGTTGGTGGT TGGTTAGGCG CAAGGCTTGG CCTAAATAAC
ACCATGAACA TTGGCTTAGG CTTGCAAATA GTGGCGTTAG CTATGCTTAC CGTATCCACA
GAAATGTTGA CTGTCGTTTA TGTTATGGCG GCACAGGCCT TGTCGGGTAT CGCCAAAGAT
TTAAATAAAA TGAGTGCCAA AAGTGCCATT AAAACCCTAG TGCCAGCAGA TGCTGAAGGC
AAACTTTATC AATGGGTGGC GTTGTTAACG GGCTCAAAAA ATGCCTTAAA AGGGATTGGT
TTCTTTTTAG GCGGCGTATT GCTCACAAGC TTAGGATTTA GAGGCGCCAT TATCTTAATG
GCTTCACTAT TAGGCATTGT ATGGTTATGT AGTTTAGTGG CCTTAAAAGA TAATTTGGGC
AAAGCTAAAA ACAAACCTAA ATTCAAAGAT ATTTTTTCTA AAAGTCAGTC GATTAACATC
CTTTCGGCGG CGCGGATGTT TTTATTTGGC GCTAGGGATG TATGGTTTGT GGTGGCACTA
CCGGTATTTT TAGCCACAAC CTTTGGTTGG GATCATTGGT GGGTTGGCAG CTTTATGGCC
AGTTGGGTTA TTGGTTATGG TGTGGTGCAA TCCGTTGCAC CTTATTTCAC CGGTAAACGA
CAAGGAAAAG TACCCAGCGG CCGAGCAGTA TTTGCATGGG CAACTTACTT ACTACTCATT
CCCGTCGCGA TTGCAGTGGC GTTACATGCA GATTTTTATG TGCTGGAAAG TGTCGTTATC
GGCTTATTAG TGTTTGGTGC GGTGTTTGCG ATTAACTCGT CATTGCATAG CTACTTAATT
GTTAGCTATG CCGGCAGTGA TGGTGTGTCA CTGGATGTGG GCTTTTACTA TATGGCCAAT
GCCATGGGAA GGTTAATCGG TACGGTACTG TCTGGTTGGG TGTATCAAGC TTATGGTTTA
GAAGCCTGCT TATGGATATC CAGTGGCTTT ATAGCTCTTG CTGCTTTAAT TTCACTTAAG
TTGCCTCATA AAGGGTAA
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| Protein sequence | MGLDSLRSLS PSIKQYLLIT GNYWAFTLTD GALRMLVVLY FHQLGYSPLN IAMLFLFYEI
FGVVTNLVGG WLGARLGLNN TMNIGLGLQI VALAMLTVST EMLTVVYVMA AQALSGIAKD
LNKMSAKSAI KTLVPADAEG KLYQWVALLT GSKNALKGIG FFLGGVLLTS LGFRGAIILM
ASLLGIVWLC SLVALKDNLG KAKNKPKFKD IFSKSQSINI LSAARMFLFG ARDVWFVVAL
PVFLATTFGW DHWWVGSFMA SWVIGYGVVQ SVAPYFTGKR QGKVPSGRAV FAWATYLLLI
PVAIAVALHA DFYVLESVVI GLLVFGAVFA INSSLHSYLI VSYAGSDGVS LDVGFYYMAN
AMGRLIGTVL SGWVYQAYGL EACLWISSGF IALAALISLK LPHKG
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