| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3997 |
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| Symbol | |
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| ID | 4280888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4764677 |
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| End bp | 4766044 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136818 |
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| Product | sigma54 specific transcriptional regulator, Fis family protein |
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| Protein accession | YP_752661 |
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| Protein GI | 114565147 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGTC CAACACTTTT TTATCATCTA CACCGTCGTC AAGAAGGTGA AGCACGACTC
CTTGCCTTGC CGAGTTGTCA GCACTTTAAT AAGATTGCTA GTTCAGTTGA CCAGCCCTGG
TTAGACCAAC TGCACAGTAA CTCGATAGAT GTTGCGATCA TTGAATTATC ACAGTTAAGC
CAACTAGAAT ACGCAGAGTT AACTGACAGT GCGTTAATGT CGGATATTGA GTTCATCTTC
TTAAGCGAAG GTAAACCGAA TCCTAACTTA GATCATTTAA TGTCAAAAAG TGCTGGTTAC
CATTTTCGCC AGCCTTACGA TGCCGATGCA ATTAACGATA CCTTAGAAGA CTTTGCCCAA
GACTTGCAGT CGCAATCGAC TAAGTTAAAA CAGCCCCTTT CGAGTGAACT AGACCAATAC
GGTTTATTGG TTGGTTCATC GCGGTCAATG CACAAGTTGT ATCGTACTAT TCGCAAAGTT
GCCGTCACCG AAAGCAACGT ACTTATTGTC GGTGAAAGCG GTGTCGGTAA AGAGCTTGTA
GCCAACACGA TTCATTTGGC CAGTAACCGA GTCAATCAAC CGTTTATCGC CATCAACTGT
GGCGCATTAA GCCCTGAATT GGTCGACAGC GAACTGTTTG GCCATGTAAA AGGCGCTTTT
ACCGGTGCTC ATCGTGATCA CCGCGGTGTG TTCGAGCAAG CTGAAGGTGG TACCTTATTT
CTTGATGAAG TCACCGAAAT GCCATTGGAA CATCAAGTCA AATTGCTACG CGTACTCGAA
AACAATGAAT ATCGTTCTGT TGGCTCACAA CACCTTAAAA AAGCCAATGT TCGCATTGTG
GCTGCAACTA ATCGCGATCC AGCTGACGCT ATTGATGCTG GCCGTTTTCG CGAAGATTTA
TACTTTCGTT TAGCGCATTT TCCTATCCAC GTGCCACCAT TACGCGATCG TAACGATGAC
ATAACGGGTT TAGCCCAACA CTTTCTAGCC TATCGAAATA CCGCTGAAAA ACTCACTAAA
ACCTTTTCGG ATGATGCTCT TAAACTTATC CAACAACAGA AATGGTCCGG AAATGTCCGC
GAATTAAAAC ACGCAATAGA ACGTGCATAT ATTTTGGCAG AAGATACCAT TCTACCTAGC
CATATCACGG TGACACCTCT AGAACCATCA ACAGAACCTT TAGCTGACGA TGTACAAATA
CCTGCTGGCA TGCGCCTAGA CGAACTTGAA AAAGTTGCTA TTTTTCAGGC ACTTGATAAA
TCTATGGGCA ATAAAAATGA TACTGCCAAA CAGCTAGGCA TTAGCGTTAA AACCCTTTAT
AACAAACTCA GCAAGTACGA AGAGCAAACC GATTCAGACG AACCATAG
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| Protein sequence | MPRPTLFYHL HRRQEGEARL LALPSCQHFN KIASSVDQPW LDQLHSNSID VAIIELSQLS
QLEYAELTDS ALMSDIEFIF LSEGKPNPNL DHLMSKSAGY HFRQPYDADA INDTLEDFAQ
DLQSQSTKLK QPLSSELDQY GLLVGSSRSM HKLYRTIRKV AVTESNVLIV GESGVGKELV
ANTIHLASNR VNQPFIAINC GALSPELVDS ELFGHVKGAF TGAHRDHRGV FEQAEGGTLF
LDEVTEMPLE HQVKLLRVLE NNEYRSVGSQ HLKKANVRIV AATNRDPADA IDAGRFREDL
YFRLAHFPIH VPPLRDRNDD ITGLAQHFLA YRNTAEKLTK TFSDDALKLI QQQKWSGNVR
ELKHAIERAY ILAEDTILPS HITVTPLEPS TEPLADDVQI PAGMRLDELE KVAIFQALDK
SMGNKNDTAK QLGISVKTLY NKLSKYEEQT DSDEP
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